2YL9
INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | BETA-N-ACETYLHEXOSAMINIDASE | polymer | 457 | 51267.5 | 4 | UniProt (P49610) Pfam (PF00728) | STREPTOCOCCUS PNEUMONIAE | GLYCOSIDE HYDROLASE GH20 |
| 2 | E, F, G, H (E, F, G, H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 4 | In PDB GlyTouCan (G13201UL) | |||
| 3 | AA, AB, BA, BB, CA... (B, D, C, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 46 | Chemie (EDO) | |||
| 4 | CB, DB, EB, FB (A, B, C, D) | water | water | 18.0 | 797 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 627 - 1062 (UniProt: P49610)
| PDB | External Database | Details |
|---|---|---|
| Met 606 | - | expression tag |
| Gly 607 | - | expression tag |
| Ser 608 | - | expression tag |
| Ser 609 | - | expression tag |
| His 610 | - | expression tag |
| His 611 | - | expression tag |
| His 612 | - | expression tag |
| His 613 | - | expression tag |
| His 614 | - | expression tag |
| His 615 | - | expression tag |
| Ser 616 | - | expression tag |
| Ser 617 | - | expression tag |
| Gly 618 | - | expression tag |
| Leu 619 | - | expression tag |
| Val 620 | - | expression tag |
| Pro 621 | - | expression tag |
| Arg 622 | - | expression tag |
| Gly 623 | - | expression tag |
| Ser 624 | - | expression tag |
| His 625 | - | expression tag |
| Met 626 | - | expression tag |
| Gln 805 | Glu 805 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 205070.1 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 2994.7 | |
| Non-Polymers* | Number of molecules | 46 |
| Total formula weight | 2855.1 | |
| All* | Total formula weight | 210920.0 |






