2YL9
INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D (A, B, C, D) | BETA-N-ACETYLHEXOSAMINIDASE | polymer | 457 | 51267.5 | 4 | UniProt (P49610) Pfam (PF00728) | STREPTOCOCCUS PNEUMONIAE | GLYCOSIDE HYDROLASE GH20 |
2 | E, F, G, H (E, F, G, H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 4 | In PDB GlyTouCan (G13201UL) | |||
3 | AA, AB, BA, BB, CA... (B, D, C, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 46 | Chemie (EDO) | |||
4 | CB, DB, EB, FB (A, B, C, D) | water | water | 18.0 | 797 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 627 - 1062 (UniProt: P49610)
PDB | External Database | Details |
---|---|---|
Met 606 | - | expression tag |
Gly 607 | - | expression tag |
Ser 608 | - | expression tag |
Ser 609 | - | expression tag |
His 610 | - | expression tag |
His 611 | - | expression tag |
His 612 | - | expression tag |
His 613 | - | expression tag |
His 614 | - | expression tag |
His 615 | - | expression tag |
Ser 616 | - | expression tag |
Ser 617 | - | expression tag |
Gly 618 | - | expression tag |
Leu 619 | - | expression tag |
Val 620 | - | expression tag |
Pro 621 | - | expression tag |
Arg 622 | - | expression tag |
Gly 623 | - | expression tag |
Ser 624 | - | expression tag |
His 625 | - | expression tag |
Met 626 | - | expression tag |
Gln 805 | Glu 805 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 205070.1 | |
Branched | Number of molecules | 4 |
Total formula weight | 2994.7 | |
Non-Polymers* | Number of molecules | 46 |
Total formula weight | 2855.1 | |
All* | Total formula weight | 210920.0 |