2YA3
STRUCTURE OF THE REGULATORY FRAGMENT OF MAMMALIAN AMPK IN COMPLEX WITH COUMARIN ADP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 5'-AMP-ACTIVATED PROTEIN KINASE CATALYTIC SUBUNIT ALPHA-1 | polymer | 173 | 19486.8 | 1 | UniProt (P54645) Pfam (PF16579) | RATTUS NORVEGICUS (NORWAY RAT) | AMPK SUBUNIT ALPHA-1 |
| 2 | B (B) | 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT BETA-2 | polymer | 87 | 10040.8 | 1 | UniProt (O43741) Pfam (PF04739) | HOMO SAPIENS (HUMAN) | AMPK SUBUNIT BETA-2 |
| 3 | C (E) | 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1 | polymer | 330 | 37434.1 | 1 | UniProt (P80385) Pfam (PF00571) | RATTUS NORVEGICUS (NORWAY RAT) | AMPK SUBUNIT ALPHA-1, AMPK GAMMA1, AMPK SUBUNIT GAMMA-1, AMPKG |
| 4 | D, E (E) | 3'-(7-diethylaminocoumarin-3-carbonylamino)-3'-deoxy-ADP | non-polymer | 669.5 | 2 | Chemie (J7V) | |||
| 5 | F (E) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 1 | Chemie (AMP) | |||
| 6 | G, H, I (A, B, E) | water | water | 18.0 | 142 | Chemie (HOH) |
Sequence modifications
A: 396 - 544 (UniProt: P54645)
B: 187 - 272 (UniProt: O43741)
| PDB | External Database | Details |
|---|---|---|
| Met 378 | - | expression tag |
| Ser 379 | - | expression tag |
| His 380 | - | expression tag |
| His 381 | - | expression tag |
| His 382 | - | expression tag |
| His 383 | - | expression tag |
| His 384 | - | expression tag |
| His 385 | - | expression tag |
| Ser 386 | - | expression tag |
| Gly 387 | - | expression tag |
| Leu 388 | - | expression tag |
| Val 389 | - | expression tag |
| Pro 390 | - | expression tag |
| Arg 391 | - | expression tag |
| Gly 392 | - | expression tag |
| Ser 393 | - | cloning artifact |
| Met 394 | - | cloning artifact |
| Ala 395 | - | cloning artifact |
| Asn 545 | - | cloning artifact |
| Ser 546 | - | cloning artifact |
| Cys 547 | - | cloning artifact |
| Thr 548 | - | cloning artifact |
| Val 549 | - | cloning artifact |
| Asn 550 | - | cloning artifact |
| PDB | External Database | Details |
|---|---|---|
| Met 186 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 66961.7 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 1686.2 | |
| All* | Total formula weight | 68647.9 |






