2XWD
X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH 5N,6O-(N'-(N-OCTYL)IMINO)NOJIRIMYCIN IN THE ACTIVE SITE
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | GLUCOSYLCERAMIDASE | polymer | 505 | 56589.3 | 2 | UniProt (P04062) Pfam (PF02055) Pfam (PF17189) | HOMO SAPIENS (HUMAN) | ACID-BETA-GLUCOSIDASE, ALGLUCERASE, BETA-GLUCOCEREBROSIDASE, D-GLUCOSYL-N-ACYLSPHINGOSINE GLUCOHYDROLASE, IMIGLUCERASE |
| 2 | C (C) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G73622RM) | |||
| 3 | D (D) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G18638YB) | |||
| 4 | E, F, G, H, I... (A, B) | SULFATE ION | non-polymer | 96.1 | 10 | Chemie (SO4) | |||
| 5 | J, P (A, B) | (3Z,5S,6R,7S,8R,8aR)-3-(octylimino)hexahydro[1,3]oxazolo[3,4-a]pyridine-5,6,7,8-tetrol | non-polymer | 316.4 | 2 | Chemie (LGS) | |||
| 6 | Q, R (A, B) | water | water | 18.0 | 266 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 497 (UniProt: P04062)
| PDB | External Database | Details |
|---|---|---|
| Glu -1 | - | expression tag |
| Phe 0 | - | expression tag |
| His 495 | Arg 514 | variant |
| Leu 498 | - | expression tag |
| Leu 499 | - | expression tag |
| Val 500 | - | expression tag |
| Asp 501 | - | expression tag |
| Thr 502 | - | expression tag |
| Met 503 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 113178.6 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1465.4 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 1593.4 | |
| All* | Total formula weight | 116237.4 |
