2XQY
CRYSTAL STRUCTURE OF PSEUDORABIES CORE FRAGMENT OF GLYCOPROTEIN H IN COMPLEX WITH FAB D6.3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, E) | ENVELOPE GLYCOPROTEIN H | polymer | 572 | 60391.1 | 2 | UniProt (P27416) Pfam (PF17488) | SUID HERPESVIRUS (PSEUDORABIES VIRUS) | GH |
| 2 | C, D (G, J) | A13-D6.3 MONOCLONAL ANTIBODY | polymer | 261 | 28098.1 | 2 | MUS MUSCULUS (HOUSE MOUSE) | ||
| 3 | E, F (K, L) | A13-D6.3 MONOCLONAL ANTIBODY | polymer | 220 | 24278.8 | 2 | MUS MUSCULUS (HOUSE MOUSE) | ||
| 4 | G, H, I, J, K (B, C, D, F, H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 5 | In PDB GlyTouCan (G42666HT) | |||
| 5 | L (E) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 6 | M, N, O, P, Q... (A, E, G, J, K...) | water | water | 18.0 | 952 | Chemie (HOH) |
Sequence modifications
A, E: 107 - 639 (UniProt: P27416)
| PDB | External Database | Details |
|---|---|---|
| Arg 105 | - | expression tag |
| Ser 106 | - | expression tag |
| Phe 640 | - | expression tag |
| Glu 641 | - | expression tag |
| Asp 642 | - | expression tag |
| Asp 643 | - | expression tag |
| Asp 644 | - | expression tag |
| Asp 645 | - | expression tag |
| Lys 646 | - | expression tag |
| Ala 647 | - | expression tag |
| Gly 648 | - | expression tag |
| Trp 649 | - | expression tag |
| Ser 650 | - | expression tag |
| His 651 | - | expression tag |
| Pro 652 | - | expression tag |
| Gln 653 | - | expression tag |
| Phe 654 | - | expression tag |
| Glu 655 | - | expression tag |
| Lys 656 | - | expression tag |
| Gly 657 | - | expression tag |
| Gly 658 | - | expression tag |
| Gly 659 | - | expression tag |
| Ser 660 | - | expression tag |
| Gly 661 | - | expression tag |
| Gly 662 | - | expression tag |
| Gly 663 | - | expression tag |
| Ser 664 | - | expression tag |
| Gly 665 | - | expression tag |
| Gly 666 | - | expression tag |
| Gly 667 | - | expression tag |
| Ser 668 | - | expression tag |
| Trp 669 | - | expression tag |
| Ser 670 | - | expression tag |
| His 671 | - | expression tag |
| Pro 672 | - | expression tag |
| Gln 673 | - | expression tag |
| Phe 674 | - | expression tag |
| Glu 675 | - | expression tag |
| Lys 676 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 225535.8 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 2122.0 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 227879.1 |
