2XDM
Crystal structure of a complex between Actinomadura R39 DD peptidase and a peptidoglycan mimetic boronate inhibitor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE | polymer | 466 | 47647.0 | 4 | UniProt (P39045) Pfam (PF02113) In PDB | ACTINOMADURA | DD-PEPTIDASE, DD-CARBOXYPEPTIDASE, PENICILLIN-BINDING PROTEIN, PBP |
| 2 | D, A, B, C | SULFATE ION | non-polymer | 96.1 | 20 | Chemie (SO4) | |||
| 3 | D, A | COBALT (II) ION | non-polymer | 58.9 | 4 | Chemie (CO) | |||
| 4 | B, C | (D-ALPHA-AMINOPIMELYLAMINO)-D-1-ETHYLBORONIC ACID | non-polymer | 263.1 | 2 | Chemie (BO8) | |||
| 5 | D | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 1 | Chemie (MES) | |||
| 6 | water | water | 18.0 | 555 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 190588.0 | |
| Non-Polymers* | Number of molecules | 27 |
| Total formula weight | 2878.4 | |
| All* | Total formula weight | 193466.4 |
