2XD5
Structural insights into the catalytic mechanism and the role of Streptococcus pneumoniae PBP1b
Replaces: 2JCIEntity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | PENICILLIN-BINDING PROTEIN 1B | polymer | 494 | 54142.9 | 2 | UniProt (Q7CRA4) Pfam (PF00905) | STREPTOCOCCUS PNEUMONIAE | |
| 2 | C, G (A, B) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 3 | D, H (A, B) | N-BENZOYL-D-ALANINE | non-polymer | 193.2 | 2 | Chemie (S2D) | |||
| 4 | E, F (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 5 | I, J (A, B) | water | water | 18.0 | 250 | Chemie (HOH) |
Sequence modifications
A, B: 323 - 791 (UniProt: Q7CRA4)
| PDB | External Database | Details |
|---|---|---|
| Asp 101 | - | expression tag |
| Ile 102 | - | expression tag |
| Ser 103 | - | expression tag |
| Ser 104 | - | expression tag |
| Ile 105 | - | expression tag |
| Ser 106 | - | expression tag |
| Glu 107 | - | expression tag |
| Ile 108 | - | expression tag |
| Thr 109 | - | expression tag |
| Tyr 110 | - | expression tag |
| Ser 111 | - | expression tag |
| Asp 112 | - | expression tag |
| Gly 113 | - | expression tag |
| Thr 114 | - | expression tag |
| Val 115 | - | expression tag |
| Ile 116 | - | expression tag |
| Ala 117 | - | expression tag |
| Ser 118 | - | expression tag |
| Ile 119 | - | expression tag |
| Glu 120 | - | expression tag |
| Ser 121 | - | expression tag |
| Asp 122 | - | expression tag |
| Met 123 | - | expression tag |
| Leu 124 | - | expression tag |
| Arg 125 | - | expression tag |
| Gln 336 | Arg 336 | engineered mutation |
| Gln 686 | Arg 686 | engineered mutation |
| Gln 687 | Arg 687 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 108285.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 649.4 | |
| All* | Total formula weight | 108935.3 |






