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2XD5

Structural insights into the catalytic mechanism and the role of Streptococcus pneumoniae PBP1b

Replaces:  2JCI
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BPENICILLIN-BINDING PROTEIN 1Bpolymer49454142.92UniProt (Q7CRA4)
Pfam (PF00905)
In PDB
STREPTOCOCCUS PNEUMONIAE
2A, BSULFATE IONnon-polymer96.12Chemie (SO4)
3A, BN-BENZOYL-D-ALANINEnon-polymer193.22Chemie (S2D)
4ACHLORIDE IONnon-polymer35.52Chemie (CL)
5waterwater18.0250Chemie (HOH)
Sequence modifications
A, B: 323 - 791 (UniProt: Q7CRA4)
PDBExternal DatabaseDetails
Asp 101-expression tag
Ile 102-expression tag
Ser 103-expression tag
Ser 104-expression tag
Ile 105-expression tag
Ser 106-expression tag
Glu 107-expression tag
Ile 108-expression tag
Thr 109-expression tag
Tyr 110-expression tag
Ser 111-expression tag
Asp 112-expression tag
Gly 113-expression tag
Thr 114-expression tag
Val 115-expression tag
Ile 116-expression tag
Ala 117-expression tag
Ser 118-expression tag
Ile 119-expression tag
Glu 120-expression tag
Ser 121-expression tag
Asp 122-expression tag
Met 123-expression tag
Leu 124-expression tag
Arg 125-expression tag
Gln 336Arg 336engineered mutation
Gln 686Arg 686engineered mutation
Gln 687Arg 687engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight108285.9
Non-Polymers*Number of molecules6
Total formula weight649.4
All*Total formula weight108935.3
*Water molecules are not included.

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PDB entries from 2024-06-12

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