2WMI
Crystal structure of the catalytic module of a family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 in complex with the A-trisaccharide blood group antigen.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | FUCOLECTIN-RELATED PROTEIN | polymer | 606 | 69895.4 | 1 | UniProt (A5LBQ0) | STREPTOCOCCUS PNEUMONIAE | GLYCOSIDE HYDROLASE |
| 2 | B (B) | FUCOLECTIN-RELATED PROTEIN | polymer | 606 | 69853.3 | 1 | UniProt (A5LBQ0) | STREPTOCOCCUS PNEUMONIAE | GLYCOSIDE HYDROLASE |
| 3 | C, D (C, D) | alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose | branched | 529.5 | 2 | In PDB GlyTouCan (G00066MO) | |||
| 4 | E, F (A, B) | water | water | 18.0 | 1024 | Chemie (HOH) |
Sequence modifications
A: 421 - 1005 (UniProt: A5LBQ0)
B: 421 - 1005 (UniProt: A5LBQ0)
| PDB | External Database | Details |
|---|---|---|
| Met 398 | - | expression tag |
| Gly 399 | - | expression tag |
| Ser 400 | - | expression tag |
| Ser 401 | - | expression tag |
| His 402 | - | expression tag |
| His 403 | - | expression tag |
| His 404 | - | expression tag |
| His 405 | - | expression tag |
| His 406 | - | expression tag |
| His 407 | - | expression tag |
| Ser 408 | - | expression tag |
| Ser 409 | - | expression tag |
| Gly 410 | - | expression tag |
| Leu 411 | - | expression tag |
| Val 412 | - | expression tag |
| Pro 413 | - | expression tag |
| Arg 414 | - | expression tag |
| Gly 415 | - | expression tag |
| Ser 416 | - | expression tag |
| His 417 | - | expression tag |
| Met 418 | - | expression tag |
| Ala 419 | - | expression tag |
| Ser 420 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 398 | - | expression tag |
| Gly 399 | - | expression tag |
| Ser 400 | - | expression tag |
| Ser 401 | - | expression tag |
| His 402 | - | expression tag |
| His 403 | - | expression tag |
| His 404 | - | expression tag |
| His 405 | - | expression tag |
| His 406 | - | expression tag |
| His 407 | - | expression tag |
| Ser 408 | - | expression tag |
| Ser 409 | - | expression tag |
| Gly 410 | - | expression tag |
| Leu 411 | - | expression tag |
| Val 412 | - | expression tag |
| Pro 413 | - | expression tag |
| Arg 414 | - | expression tag |
| Gly 415 | - | expression tag |
| Ser 416 | - | expression tag |
| His 417 | - | expression tag |
| Met 418 | - | expression tag |
| Ala 419 | - | expression tag |
| Ser 420 | - | expression tag |
| Ser 746 | Glu 748 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 139748.7 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1059.0 | |
| All* | Total formula weight | 140807.7 |
