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2W8K

Y-family DNA polymerase Dpo4 bypassing N2-naphthyl-guanine adduct in syn orientation

Replaces:  2V4S
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA POLYMERASE IVpolymer35841086.81UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
SULFOLOBUS SOLFATARICUS
2B
(P)
5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*DOC)-3'polymer144369.91
3C
(T)
5'-D(*TP*CP*AP*CP*N2GP*GP*AP*AP*TP*CP*CP *TP*TP*CP*CP*CP*CP*C)-3'polymer185512.71
4D
(A)
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (DGT)
PubChem (177678918)
PubChem (136110594)
PubChem (135398599)
PubChem (135402022)
PubChem (135566345)
PubChem (136254580)
PubChem (136633653)
PubChem (136828797)
PubChem (136828798)
PubChem (137226754)
PubChem (137257907)
PubChem (171699498)
5E, F, G
(A)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
PubChem (888)
6H, I, J
(A, P, T)
waterwater18.080Chemie (HOH)
Sequence modifications
A: -5 - 0 (PDB: 2W8K)
A: 1 - 352 (UniProt: Q97W02)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight50969.3
Non-Polymers*Number of molecules4
Total formula weight580.1
All*Total formula weight51549.4
*Water molecules are not included.

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PDB entries from 2026-05-13

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