2VT0
X-ray structure of a conjugate with conduritol-beta-epoxide of acid-beta-glucosidase overexpressed in cultured plant cells
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | GLUCOSYLCERAMIDASE | polymer | 505 | 56589.3 | 2 | UniProt (Q9BDT0) Pfam (PF02055) Pfam (PF17189) UniProt (by SIFTS) (P04062) In PDB | HOMO SAPIENS (HUMAN) | BETA-GLUCOCEREBROSIDASE, ACID BETA-GLUCOSIDASE, D-GLUCOSYL-N-ACYLSPHINGOSINE GLUCOHYDROLASE, GLUCOSIDASE |
2 | C | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G73622RM) | |||
3 | D | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G11971MR) | |||
4 | A, B | (1R,2R,3S,4S,5S,6S)-CYCLOHEXANE-1,2,3,4,5,6-HEXOL | non-polymer | 180.2 | 2 | Chemie (CBU) | |||
5 | A, B | SULFATE ION | non-polymer | 96.1 | 10 | Chemie (SO4) | |||
6 | water | water | 18.0 | 464 | Chemie (HOH) |
Sequence modifications
A, B: -1 - 0 (PDB: 2VT0)
A, B: 498 - 503 (PDB: 2VT0)
A, B: 1 - 497 (UniProt: Q9BDT0)
A, B: 498 - 503 (PDB: 2VT0)
A, B: 1 - 497 (UniProt: Q9BDT0)
PDB | External Database | Details |
---|---|---|
Pro 55 | Thr 94 | conflict |
His 495 | Arg 534 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 113178.6 | |
Branched | Number of molecules | 2 |
Total formula weight | 1303.2 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 1320.9 | |
All* | Total formula weight | 115802.7 |