2VKD
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF LETHAL TOXIN FROM CLOSTRIDIUM SORDELLII IN COMPLEX WITH UDP-GLC AND MANGANESE ION
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | CYTOTOXIN L | polymer | 546 | 63606.7 | 3 | UniProt (Q46342) Pfam (PF11647) Pfam (PF12918) Pfam (PF12919) | CLOSTRIDIUM SORDELLII | LETHAL TOXIN |
| 2 | D, F, G, H, J (A, B, C) | MANGANESE (II) ION | non-polymer | 54.9 | 5 | Chemie (MN) | |||
| 3 | E, I, K (A, B, C) | URIDINE-5'-DIPHOSPHATE-GLUCOSE | non-polymer | 566.3 | 3 | Chemie (UPG) | |||
| 4 | L, M, N (A, B, C) | water | water | 18.0 | 148 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 546 (UniProt: Q46342)
| PDB | External Database | Details |
|---|---|---|
| Ala 13 | Val 13 | engineered mutation |
| Met 289 | Ile 289 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 190820.2 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1973.6 | |
| All* | Total formula weight | 192793.8 |
