2VJV
Crystal structure of the IS608 transposase in complex with left end 26-mer DNA hairpin and a 6-mer DNA representing the left end cleavage site
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | TRANSPOSASE ORFA | polymer | 159 | 18392.4 | 2 | UniProt (Q933Z0) Pfam (PF01797) In PDB | HELICOBACTER PYLORI | IS608 TRANSPOSASE |
2 | C, D | 5'-D(*DA*DA*DA*DG*DC*DC*DC*DC*DT*DA*DG*DC*DTP*DT *DT*DT*DA*DG*DC*DT*DA*DT*DG*DG*DG*DGP)-3' | polymer | 26 | 8003.2 | 2 | HELICOBACTER PYLORI | LEFT END 26-MER HAIRPIN | |
3 | E, F | 5'-D(*DT*DA*DT*DT*DA*DCP)-3' | polymer | 6 | 1783.2 | 2 | HELICOBACTER PYLORI | 6-MER LEFT END CLEAVAGE SITE | |
4 | C, D, E | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
5 | water | water | 18.0 | 275 | Chemie (HOH) |
Sequence modifications
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 56357.6 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 72.9 | |
All* | Total formula weight | 56430.5 |