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2VJV

Crystal structure of the IS608 transposase in complex with left end 26-mer DNA hairpin and a 6-mer DNA representing the left end cleavage site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BTRANSPOSASE ORFApolymer15918392.42UniProt (Q933Z0)
Pfam (PF01797)
In PDB
HELICOBACTER PYLORIIS608 TRANSPOSASE
2C, D5'-D(*DA*DA*DA*DG*DC*DC*DC*DC*DT*DA*DG*DC*DTP*DT *DT*DT*DA*DG*DC*DT*DA*DT*DG*DG*DG*DGP)-3'polymer268003.22HELICOBACTER PYLORILEFT END 26-MER HAIRPIN
3E, F5'-D(*DT*DA*DT*DT*DA*DCP)-3'polymer61783.22HELICOBACTER PYLORI6-MER LEFT END CLEAVAGE SITE
4C, D, EMAGNESIUM IONnon-polymer24.33Chemie (MG)
5waterwater18.0275Chemie (HOH)
Sequence modifications
A, B: -3 - 1 (PDB: 2VJV)
A, B: 2 - 155 (UniProt: Q933Z0)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight56357.6
Non-Polymers*Number of molecules3
Total formula weight72.9
All*Total formula weight56430.5
*Water molecules are not included.

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PDB entries from 2024-07-31

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