2VBJ
Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA ENDONUCLEASE I-CREI | polymer | 152 | 17566.2 | 1 | UniProt (P05725) Pfam (PF00961) In PDB | CHLAMYDOMONAS REINHARDTII | AMEL3-4-CA, 23S RRNA INTRON PROTEIN |
2 | B | DNA ENDONUCLEASE I-CREI | polymer | 152 | 17454.1 | 1 | UniProt (P05725) Pfam (PF00961) In PDB | CHLAMYDOMONAS REINHARDTII | AMEL3-4-CA, 23S RRNA INTRON PROTEIN |
3 | C | 5'-D(*TP*CP*TP*GP*CP*CP*TP*TP*TP*TP *TP*TP*GP*AP*AP*GP*GP*AP*TP*CP*CP*TP*AP*A)-3' | polymer | 24 | 7325.7 | 1 | synthetic construct | ||
4 | E | 5'-D(*TP*TP*AP*GP*GP*AP*TP*CP*CP*TP *TP*CP*AP*AP*AP*AP*AP*AP*GP*GP*CP*AP*GP*A)-3' | polymer | 24 | 7410.8 | 1 | synthetic construct | ||
5 | A | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
6 | water | water | 18.0 | 330 | Chemie (HOH) |
Sequence modifications
A: 2 - 153 (UniProt: P05725)
B: 2 - 153 (UniProt: P05725)
PDB | External Database | Details |
---|---|---|
Glu 28 | Lys 28 | conflict |
Arg 38 | Gln 38 | conflict |
Lys 40 | Ser 40 | conflict |
Thr 42 | Ala 42 | conflict |
Lys 44 | Gln 44 | conflict |
Glu 70 | Arg 70 | conflict |
Asn 75 | Asp 75 | conflict |
Arg 85 | His 85 | conflict |
Thr 109 | Ile 109 | conflict |
Glu 110 | Trp 110 | conflict |
Gln 111 | Arg 111 | conflict |
PDB | External Database | Details |
---|---|---|
Ala 19 | Gly 19 | conflict |
Glu 28 | Lys 28 | conflict |
Ser 33 | Tyr 33 | conflict |
Arg 38 | Gln 38 | conflict |
Lys 40 | Ser 40 | conflict |
Thr 42 | Ala 42 | conflict |
Ser 70 | Arg 70 | conflict |
Asn 75 | Asp 75 | conflict |
Glu 110 | Trp 110 | conflict |
Gln 111 | Arg 111 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 49756.8 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 80.2 | |
All* | Total formula weight | 49837.0 |