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2R1P

OpdA from Agrobacterium radiobacter with bound product diethyl thiophosphate from co-crystallisation with tetraethyl dithiopyrophosphate- 1.8 A

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Phosphotriesterasepolymer32835600.51UniProt (Q93LD7)
Pfam (PF02126)
Agrobacterium tumefaciensProtein OpdA
2B
(A)
FE (II) IONnon-polymer55.81Chemie (FE2)
3C
(A)
COBALT (II) IONnon-polymer58.91Chemie (CO)
4D
(A)
O,O-DIETHYL HYDROGEN THIOPHOSPHATEnon-polymer170.21Chemie (DPJ)
5E
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
6F
(A)
waterwater18.0288Chemie (HOH)
Sequence modifications
A: 34 - 361 (UniProt: Q93LD7)
PDBExternal DatabaseDetails
Ala 92Ser 91engineered mutation
Arg 185Lys 184engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight35600.5
Non-Polymers*Number of molecules4
Total formula weight347.0
All*Total formula weight35947.6
*Water molecules are not included.

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PDB entries from 2025-07-23

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