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2QA4

A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1023S RIBOSOMAL RNApolymer2922946076.41GenBank (3377779)Haloarcula marismortui
295S RIBOSOMAL RNApolymer12239318.41GenBank (3377779)Haloarcula marismortui
3A50S ribosomal protein L2Ppolymer24025354.71UniProt (P20276)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Haloarcula marismortui
4B50S ribosomal protein L3Ppolymer33837396.41UniProt (P20279)
Pfam (PF00297)
In PDB
Haloarcula marismortui
5C50S ribosomal protein L4Ppolymer24626442.11UniProt (P12735)
Pfam (PF00573)
In PDB
Haloarcula marismortui
6D50S ribosomal protein L5Ppolymer17719551.71UniProt (P14124)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Haloarcula marismortui
7E50S ribosomal protein L6Ppolymer17819961.71UniProt (P14135)
Pfam (PF00347)
In PDB
Haloarcula marismortui
8F50S ribosomal protein L7Aepolymer12012791.91UniProt (P12743)
Pfam (PF01248)
In PDB
Haloarcula marismortui
9GACIDIC RIBOSOMAL PROTEIN P0 HOMOpolymer34837213.81UniProt (P15825)
Pfam (PF00466)
Pfam (PF17777)
In PDB
Haloarcula marismortui
10H50S ribosomal protein L10epolymer17119068.61UniProt (P60617)
Pfam (PF00252)
In PDB
Haloarcula marismortui
11I50S ribosomal protein L11Ppolymer16217097.51UniProt (P14122)
Pfam (PF03946)
Pfam (PF00298)
In PDB
Haloarcula marismortui
12J50S ribosomal protein L13Ppolymer14516249.21UniProt (P29198)
Pfam (PF00572)
In PDB
Haloarcula marismortui
13K50S ribosomal protein L14Ppolymer13214191.21UniProt (P22450)
Pfam (PF00238)
In PDB
Haloarcula marismortui
14L50S ribosomal protein L15Ppolymer16518005.41UniProt (P12737)
Pfam (PF00828)
In PDB
Haloarcula marismortui
15M50S ribosomal protein L15epolymer19622418.31UniProt (P60618)
Pfam (PF00827)
In PDB
Haloarcula marismortui
16N50S ribosomal protein L18Ppolymer18720640.91UniProt (P14123)
Pfam (PF17144)
In PDB
Haloarcula marismortui
17O50S ribosomal protein L18epolymer11612438.91UniProt (P12733)
Pfam (PF00828)
In PDB
Haloarcula marismortui
18P50S ribosomal protein L19epolymer14916796.51UniProt (P14119)
Pfam (PF01280)
In PDB
Haloarcula marismortui
19Q50S ribosomal protein L21epolymer9610567.81UniProt (P12734)
Pfam (PF01157)
In PDB
Haloarcula marismortui
20R50S ribosomal protein L22Ppolymer15516966.91UniProt (P10970)
Pfam (PF00237)
In PDB
Haloarcula marismortui
21S50S ribosomal protein L23Ppolymer859612.51UniProt (P12732)
Pfam (PF00276)
In PDB
Haloarcula marismortui
22T50S ribosomal protein L24Ppolymer12013671.01UniProt (P10972)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Haloarcula marismortui
23U50S ribosomal protein L24epolymer677364.91UniProt (P14116)
Pfam (PF01246)
In PDB
Haloarcula marismortui
24V50S ribosomal protein L29Ppolymer717889.91UniProt (P10971)
Pfam (PF00831)
In PDB
Haloarcula marismortui
25W50S ribosomal protein L30Ppolymer15417062.91UniProt (P14121)
Pfam (PF00327)
In PDB
Haloarcula marismortui
26X50S RIBOSOMAL PROTEIN L31Epolymer9210384.61UniProt (P18138)
Pfam (PF01198)
In PDB
Haloarcula marismortui
27Y50S ribosomal protein L32epolymer24126455.71UniProt (P12736)
Pfam (PF14520)
Pfam (PF01655)
In PDB
Haloarcula marismortui
28Z50S ribosomal protein L37Aepolymer9210259.31UniProt (P60619)
Pfam (PF01780)
In PDB
Haloarcula marismortui
29150S ribosomal protein L37epolymer576330.21UniProt (P32410)
Pfam (PF01907)
In PDB
Haloarcula marismortui
30250S ribosomal protein L39epolymer506133.11UniProt (P22452)
Pfam (PF00832)
In PDB
Haloarcula marismortui
31350S ribosomal protein L44Epolymer9210815.21UniProt (P32411)
Pfam (PF00935)
In PDB
Haloarcula marismortui
320, K, 9, A, T...MAGNESIUM IONnon-polymer24.3116Chemie (MG)
33M, 0POTASSIUM IONnon-polymer39.12Chemie (K)
340, L, M, Q, 9...SODIUM IONnon-polymer23.086Chemie (NA)
35J, 3, K, 0, L...CHLORIDE IONnon-polymer35.522Chemie (CL)
363, O, U, Z, 1CADMIUM IONnon-polymer112.45Chemie (CD)
Sequence modifications
0: 2 - 2923 (GenBank: 3377779)
PDBExternal DatabaseDetails
C 560U 3155conflict
C: 1 - 246 (UniProt: P12735)
PDBExternal DatabaseDetails
Leu 73Gln 73conflict
G: 1 - 348 (UniProt: P15825)
PDBExternal DatabaseDetails
Asp 248Ala 248conflict
H: 1 - 171 (UniProt: P60617)
PDBExternal DatabaseDetails
Asp 164-insertion
Ser 165Lys 167conflict
Ser 166Val 168conflict
Pro 167Glu 169conflict
Ala 168Arg 170conflict
-Glu 172deletion
-Glu 173deletion
-Leu 174deletion
-Leu 175deletion
Asn 170Ile 176conflict
K: 1 - 132 (UniProt: P22450)
PDBExternal DatabaseDetails
Leu 44His 44conflict
M: 0 - 195 (UniProt: P60618)
PDBExternal DatabaseDetails
Glu 13Lys 14conflict
Ala 194Gly 195conflict
Z: 1 - 92 (UniProt: P60619)
PDBExternal DatabaseDetails
Arg 10Ser 10conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains31
Total formula weight1474527.8
Non-Polymers*Number of molecules231
Total formula weight6216.7
All*Total formula weight1480744.6
*Water molecules are not included.

217705

PDB entries from 2024-03-27

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