2Q5Q
X-ray structure of phenylpyruvate decarboxylase in complex with 3-deaza-ThDP and 5-phenyl-2-oxo-valeric acid
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Phenylpyruvate decarboxylase | polymer | 565 | 60326.9 | 2 | UniProt (P51852) Pfam (PF02776) Pfam (PF00205) Pfam (PF02775) In PDB | Azospirillum brasilense | PPDC |
2 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
3 | A, B | 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE | non-polymer | 423.3 | 2 | Chemie (TPW) | |||
4 | A, B | 5-PHENYL-2-KETO-VALERIC ACID | non-polymer | 192.2 | 4 | Chemie (KPV) | |||
5 | A | L(+)-TARTARIC ACID | non-polymer | 150.1 | 1 | Chemie (TLA) | |||
6 | A, B | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
7 | water | water | 18.0 | 1117 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 545 (UniProt: P51852)
PDB | External Database | Details |
---|---|---|
Met -19 | - | expression tag |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ser -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Gln 155 | Leu 155 | expression tag |
Arg 327 | Gly 327 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 120653.7 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1998.4 | |
All* | Total formula weight | 122652.1 |