2Q5O
X-ray structure of phenylpyruvate decarboxylase in complex with 3-deaza-ThDP and phenylpyruvate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Phenylpyruvate decarboxylase | polymer | 565 | 60326.9 | 2 | UniProt (P51852) Pfam (PF02776) Pfam (PF00205) Pfam (PF02775) | Azospirillum brasilense | PPDC |
| 2 | C, G (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 3 | D, H (A, B) | 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE | non-polymer | 423.3 | 2 | Chemie (TPW) | |||
| 4 | E, F, I, J (A, B) | 3-PHENYLPYRUVIC ACID | non-polymer | 164.2 | 4 | Chemie (PPY) | |||
| 5 | K (B) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 6 | L, M (A, B) | water | water | 18.0 | 739 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 545 (UniProt: P51852)
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | expression tag |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Gln 155 | Leu 155 | expression tag |
| Arg 327 | Gly 327 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 120653.7 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1644.0 | |
| All* | Total formula weight | 122297.7 |






