2Q2T
Structure of Chlorella virus DNA ligase-adenylate bound to a 5' phosphorylated nick
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | B | 5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3' | polymer | 21 | 6494.2 | 1 | |||
2 | C | 5'-D(*AP*TP*TP*GP*CP*GP*AP*CP*(OMC)P*C)-3' | polymer | 10 | 3035.0 | 1 | |||
3 | D | 5'-D(P*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3' | polymer | 11 | 3342.2 | 1 | |||
4 | A | Chlorella virus DNA ligase | polymer | 319 | 36833.1 | 1 | UniProt (O41026) Pfam (PF01068) Pfam (PF14743) In PDB | Paramecium bursaria Chlorella virus 1 | |
5 | A | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 1 | Chemie (AMP) | |||
6 | water | water | 18.0 | 145 | Chemie (HOH) |
Sequence modifications
A: 1 - 298 (UniProt: O41026)
PDB | External Database | Details |
---|---|---|
Met -20 | - | expression tag |
Gly -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
Ser -8 | - | expression tag |
Ser -7 | - | expression tag |
Gly -6 | - | expression tag |
His -5 | - | expression tag |
Ile -4 | - | expression tag |
Glu -3 | - | expression tag |
Gly -2 | - | expression tag |
Arg -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 49704.5 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 347.2 | |
All* | Total formula weight | 50051.8 |