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2PH6

Crystal Structure of Human Beta Secretase Complexed with inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Beta-secretase 1polymer40545122.81UniProt (P56817)
Pfam (PF00026)
Homo sapiens (human)Beta-site APP cleaving enzyme 1, Beta-site amyloid precursor protein cleaving enzyme 1, Membrane-associated aspartic protease 2, Memapsin-2, Aspartyl protease 2, Asp 2, ASP2
2B
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
3C
(A)
3-({[(1R)-1-(4-FLUOROPHENYL)ETHYL]AMINO}CARBONYL)-5-[METHYL(METHYLSULFONYL)AMINO]BENZYL ALPHA-METHYL-D-PHENYLALANINATEnon-polymer541.61Chemie (712)
4D
(A)
waterwater18.0211Chemie (HOH)
Sequence modifications
A: 30 - 385 (UniProt: P56817)
PDBExternal DatabaseDetails
Met 29-initiating methionine
Ala 75Lys 136engineered mutation
Ala 77Glu 138engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight45122.8
Non-Polymers*Number of molecules2
Total formula weight637.7
All*Total formula weight45760.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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