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2P7E

Vanadate at the Active Site of a Small Ribozyme Suggests a Role for Water in Transition-State Stabilization

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
5' substrate strand, pentameric fragmentpolymer51506.01
2B
(B)
Ribozyme strand Ipolymer134182.61
3C
(C)
Ribozyme strand IIpolymer175535.41
4D
(D)
Ribozyme strand IIIpolymer195991.61
5E
(P)
3' substrate strand, octameric fragmentpolymer82501.61
6F
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
7G
(A)
bis(oxidanyl)vanadiumnon-polymer85.01Chemie (VVB)
8H, I
(B, C)
COBALT HEXAMMINE(III)non-polymer161.12Chemie (NCO)
9J, K, L, M, N
(A, B, C, D, P)
waterwater18.061Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight19717.1
Non-Polymers*Number of molecules4
Total formula weight503.3
All*Total formula weight20220.4
*Water molecules are not included.

259987

PDB entries from 2026-09-23

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