2OYI
Crystal Structure of Fragment D of gammaD298,301A Fibrinogen with the Peptide Ligand Gly-Pro-Arg-Pro-Amide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | Fibrinogen alpha chain | polymer | 66 | 7747.0 | 2 | UniProt (P02671) Pfam (PF08702) In PDB | Homo sapiens (human) | |
2 | B, E | Fibrinogen beta chain | polymer | 313 | 35940.2 | 2 | UniProt (P02675) Pfam (PF08702) Pfam (PF00147) In PDB | Homo sapiens (human) | |
3 | C, F | Fibrinogen gamma chain | polymer | 311 | 35130.0 | 2 | UniProt (P02679) Pfam (PF08702) Pfam (PF00147) In PDB | Homo sapiens (human) | |
4 | G, H, I, J | GPRP Peptide | polymer | 4 | 426.5 | 4 | |||
5 | K, L | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G21290RB) | |||
6 | B, C, E, F | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
7 | water | water | 18.0 | 150 | Chemie (HOH) |
Sequence modifications
C, F: 96 - 406 (UniProt: P02679)
PDB | External Database | Details |
---|---|---|
Ala 298 | Asp 324 | engineered mutation |
Ala 301 | Asp 327 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 10 |
Total formula weight | 159340.4 | |
Branched | Number of molecules | 2 |
Total formula weight | 1141.1 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 160.3 | |
All* | Total formula weight | 160641.8 |