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2OHT

X-ray crystal structure of beta secretase complexed with compound 7

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Beta-secretase 1polymer40244841.41UniProt (P56817)
Pfam (PF00026)
Homo sapiens (human)Beta-site APP cleaving enzyme 1, Beta-site amyloid precursor protein cleaving enzyme 1, Membrane-associated aspartic protease 2, Memapsin-2, Aspartyl protease 2, Asp 2, ASP2
2B, C, D
(A)
IODIDE IONnon-polymer126.93Chemie (IOD)
3E
(A)
DIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)
4F
(A)
N~3~-[3-(1H-INDOL-6-YL)BENZYL]PYRIDINE-2,3-DIAMINEnon-polymer314.41Chemie (IP6)
5G
(A)
waterwater18.0171Chemie (HOH)
Sequence modifications
A: -16 - 385 (UniProt: P56817)
PDBExternal DatabaseDetails
Lys -5Arg 56engineered mutation
Lys -4Arg 57engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight44841.4
Non-Polymers*Number of molecules5
Total formula weight773.2
All*Total formula weight45614.6
*Water molecules are not included.

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PDB entries from 2025-06-25

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