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2OE5

1.5 A X-ray crystal structure of Apramycin complex with RNA fragment GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC containing the human ribosomal decoding A site: RNA construct with 3'-overhang

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
RNA (5'-R(*GP*GP*CP*GP*UP*CP*GP*CP*UP*AP*GP*UP*AP*CP*CP*G)-3')polymer165129.11
2B
(B)
RNA (5'-R(*GP*GP*UP*AP*CP*UP*AP*AP*AP*AP*GP*UP*CP*GP*CP*CP*C)-3')polymer175426.31
3C
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
4D, F
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
5E
(B)
APRAMYCINnon-polymer539.61Chemie (AM2)
6G, H
(A, B)
waterwater18.0164Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight10555.4
Non-Polymers*Number of molecules4
Total formula weight684.3
All*Total formula weight11239.6
*Water molecules are not included.

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PDB entries from 2025-06-25

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