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2HVS

Structure of T4 RNA Ligase 2 with Nicked 5'-Adenylated nucleic acid duplex containing a 2'-deoxyribonucleotide at the nick

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1C, F5'-D(*AP*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*TP*TP*G)-3'polymer247440.82
2D, G5'-D(*CP*AP*AP*TP*TP*GP*CP*GP*AP*C)-R(P*(OMC)P*C)-3'polymer123637.42
3E, H5'-D(P*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*AP*T)-3'polymer123646.42
4A, BT4 RNA Ligase 2polymer33537714.22UniProt (P32277)
Pfam (PF09414)
Pfam (PF18043)
In PDB
Enterobacteria phage T4
5C, F, A2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer209.23Chemie (BTB)
6E, HADENOSINE MONOPHOSPHATEnon-polymer347.22Chemie (AMP)
7waterwater18.098Chemie (HOH)
Sequence modifications
A, B: 1 - 334 (UniProt: P32277)
PDBExternal DatabaseDetails
Ser 0-cloning artifact
Gly 112Cys 112SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight104877.5
Non-Polymers*Number of molecules5
Total formula weight1322.2
All*Total formula weight106199.7
*Water molecules are not included.

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PDB entries from 2024-07-10

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