2HVS
Structure of T4 RNA Ligase 2 with Nicked 5'-Adenylated nucleic acid duplex containing a 2'-deoxyribonucleotide at the nick
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | C, F | 5'-D(*AP*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*TP*TP*G)-3' | polymer | 24 | 7440.8 | 2 | |||
2 | D, G | 5'-D(*CP*AP*AP*TP*TP*GP*CP*GP*AP*C)-R(P*(OMC)P*C)-3' | polymer | 12 | 3637.4 | 2 | |||
3 | E, H | 5'-D(P*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*AP*T)-3' | polymer | 12 | 3646.4 | 2 | |||
4 | A, B | T4 RNA Ligase 2 | polymer | 335 | 37714.2 | 2 | UniProt (P32277) Pfam (PF09414) Pfam (PF18043) In PDB | Enterobacteria phage T4 | |
5 | C, F, A | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 209.2 | 3 | Chemie (BTB) | |||
6 | E, H | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 2 | Chemie (AMP) | |||
7 | water | water | 18.0 | 98 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 334 (UniProt: P32277)
PDB | External Database | Details |
---|---|---|
Ser 0 | - | cloning artifact |
Gly 112 | Cys 112 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 104877.5 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 1322.2 | |
All* | Total formula weight | 106199.7 |