2FRV
CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF NI-FE HYDROGENASE
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E, G, I... (S, A, C, E, G...) | PERIPLASMIC HYDROGENASE | polymer | 264 | 28351.4 | 6 | UniProt (P12943) Pfam (PF01058) Pfam (PF14720) | Desulfovibrio gigas | CYTOCHROME-C3 HYDROGENASE |
2 | B, D, F, H, J... (L, B, D, F, H...) | PERIPLASMIC HYDROGENASE | polymer | 536 | 59571.9 | 6 | UniProt (P12944) Pfam (PF00374) | Desulfovibrio gigas | CYTOCHROME-C3 HYDROGENASE |
3 | AA, CA, HA, JA, M... (C, E, S, G, A...) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 12 | Chemie (SF4) | |||
4 | BA, IA, N, PA, U... (C, E, S, G, A...) | FE3-S4 CLUSTER | non-polymer | 295.8 | 6 | Chemie (F3S) | |||
5 | DA, KA, P, RA, W... (D, F, L, H, B...) | NICKEL (II) ION | non-polymer | 58.7 | 6 | Chemie (NI) | |||
6 | EA, LA, Q, SA, X... (D, F, L, H, B...) | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
7 | AB, FA, MA, R, TA... (J, D, F, L, H...) | CARBONMONOXIDE-(DICYANO) IRON | non-polymer | 135.9 | 6 | Chemie (FCO) | |||
8 | BB, GA, NA, S, UA... (J, D, F, L, H...) | OXYGEN ATOM | non-polymer | 16.0 | 6 | Chemie (O) | |||
9 | CB, DB, EB, FB, GB... (S, L, A, B, C...) | water | water | 18.0 | 1146 | Chemie (HOH) |
Sequence modifications
S, A, C, E, G, I: 1 - 264 (UniProt: P12943)
L, B, D, F, H, J: 2 - 536 (UniProt: P12944)
PDB | External Database | Details |
---|---|---|
Val 24 | Leu 48 | conflict |
Gly 89 | Arg 113 | conflict |
PDB | External Database | Details |
---|---|---|
Lys 144 | Arg 143 | conflict |
Gly 332 | Asp 331 | conflict |
Leu 482 | His 481 | conflict |
Gly 497 | Arg 496 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 527540.0 | |
Non-Polymers* | Number of molecules | 42 |
Total formula weight | 7403.8 | |
All* | Total formula weight | 534943.8 |