2E6V
Crystal structure of VIP36 exoplasmic/lumenal domain, Ca2+/Man3GlcNAc-bound form
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (A, B, C, D, E) | Vesicular integral-membrane protein VIP36 | polymer | 253 | 28931.3 | 5 | UniProt (P49256) Pfam (PF03388) | Canis lupus familiaris (dog) | Lectin, mannose-binding 2 |
| 2 | F, G (F, G) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose | branched | 504.4 | 2 | In PDB GlyTouCan (G83092KI) | |||
| 3 | H, I, K, L, M (A, B, C, D, E) | CALCIUM ION | non-polymer | 40.1 | 5 | Chemie (CA) | |||
| 4 | J (C) | alpha-D-mannopyranose | non-polymer | 180.2 | 1 | Chemie (MAN) | |||
| 5 | N, O, P, Q, R (A, B, C, D, E) | water | water | 18.0 | 66 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E: 51 - 301 (UniProt: P49256)
| PDB | External Database | Details |
|---|---|---|
| Gly 49 | - | expression tag |
| Ser 50 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 144656.6 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1008.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 380.5 | |
| All* | Total formula weight | 146046.0 |
