2DW0
Crystal structure of VAP2 from Crotalus atrox venom (Form 2-1 crystal)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Catrocollastatin | polymer | 419 | 46912.8 | 2 | UniProt (Q90282) Pfam (PF01421) Pfam (PF00200) Pfam (PF08516) In PDB | Crotalus atrox (western diamondback rattlesnake) | VAP2, vascular apoptosis-inducing protein-2, catrocollastatin/VAP2B |
| 2 | C | alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 951.9 | 1 | In PDB GlyTouCan (G83473RC) | |||
| 3 | D | alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)][alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1114.0 | 1 | In PDB GlyTouCan (G35619UY) | |||
| 4 | A, B | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 5 | A, B | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
| 6 | A, B | 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE | non-polymer | 388.5 | 2 | Chemie (GM6) | |||
| 7 | water | water | 18.0 | 667 | Chemie (HOH) |
Sequence modifications
A, B: 191 - 609 (UniProt: Q90282)
| PDB | External Database | Details |
|---|---|---|
| Val 203 | Phe 203 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 93825.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 2065.9 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1148.2 | |
| All* | Total formula weight | 97039.6 |
