2DTU
Crystal structure of the beta hairpin loop deletion variant of RB69 gp43 in complex with DNA containing an abasic site analog
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (E, G, I, K) | 5'-D(*CP*GP*(3DR)P*CP*TP*TP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3' | polymer | 18 | 5368.5 | 4 | |||
| 2 | B, D, F, H (F, H, J, L) | 5'-D(*GP*CP*GP*GP*CP*TP*GP*TP*CP*AP*TP*AP*AP*GP*A)-3' | polymer | 15 | 4634.0 | 4 | |||
| 3 | I, J, K, L (A, B, C, D) | DNA polymerase | polymer | 896 | 103760.1 | 4 | UniProt (Q38087) Pfam (PF03104) Pfam (PF00136) | Enterobacteria phage RB69 | Gp43 |
| 4 | M, N, O, P, Q... (E, F, G, H, I...) | water | water | 18.0 | 857 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 902 (UniProt: Q38087)
| PDB | External Database | Details |
|---|---|---|
| Ala 222 | Asp 222 | engineered mutation |
| Gly 253 | Ile 253 | engineered mutation |
| - | Glu 254 | deletion |
| - | Asn 255 | deletion |
| - | Met 256 | deletion |
| - | Tyr 257 | deletion |
| - | Gly 258 | deletion |
| - | Ser 259 | deletion |
| - | Arg 260 | deletion |
| Ala 327 | Asp 327 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 455050.5 | |
| All* | Total formula weight | 455050.5 |
