2DSD
Crystal structure of human ADP-ribose pyrophosphatase NUDT5 in complex with magnesium and AMP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | ADP-sugar pyrophosphatase | polymer | 212 | 23393.4 | 2 | UniProt (Q9UKK9) Pfam (PF00293) | Homo sapiens (human) | Nucleoside diphosphate-linked moiety X motif 5, Nudix motif 5, YSA1H |
| 2 | C, D, E, G, H... (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) PubChem (888) | |||
| 3 | F, J (A, B) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 2 | Chemie (AMP) PubChem (16397049) PubChem (16760266) PubChem (224) PubChem (34768) PubChem (83862) PubChem (40467049) PubChem (40469468) PubChem (446048) PubChem (44348067) PubChem (45358029) PubChem (40459109) PubChem (515384) PubChem (46874558) PubChem (638042) PubChem (46875232) PubChem (57358045) PubChem (57879893) PubChem (57879902) PubChem (5316444) PubChem (5742864) PubChem (177678969) PubChem (6083) PubChem (1549371) PubChem (12163610) PubChem (12358355) PubChem (92144436) PubChem (122197642) PubChem (12358354) PubChem (162290139) PubChem (162946266) PubChem (171699505) | |||
| 4 | K, L (A, B) | water | water | 18.0 | 96 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 210 (UniProt: Q9UKK9)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | cloning artifact |
| Ser 0 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 46786.8 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 840.3 | |
| All* | Total formula weight | 47627.0 |
