2DFY
Crystal structure of a cyclized protein fusion of LMO4 LIM domains 1 and 2 with the LIM interacting domain of LDB1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (X, C) | fusion protein of LIM domain transcription factor LMO4 and LIM domain-binding protein 1 | polymer | 195 | 21059.6 | 2 | UniProt (P61969) Pfam (PF00412) | Mus musculus (house mouse) | CZ-FLINC4 |
| 2 | C, D, E, F, H... (X, C) | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) | |||
| 3 | G, L (X, C) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 4 | M, N (X, C) | water | water | 18.0 | 244 | Chemie (HOH) |
Sequence modifications
X, C: 18 - 152 (UniProt: P61969)
X, C: 300 - 339 (UniProt: P61969)
| PDB | External Database | Details |
|---|---|---|
| Ser 52 | Cys 52 | engineered mutation |
| Ser 64 | Cys 64 | engineered mutation |
| Thr 340 | - | linker |
| Arg 341 | - | linker |
| Glu 342 | - | linker |
| Ser 343 | - | linker |
| Gly 344 | - | linker |
| Ser 345 | - | linker |
| Ile 346 | - | linker |
| Glu 347 | - | linker |
| Phe 348 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Gly 289 | - | linker |
| Gly 290 | - | linker |
| Ser 291 | - | linker |
| Gly 292 | - | linker |
| Gly 293 | - | linker |
| Ser 294 | - | linker |
| Gly 295 | - | linker |
| Gly 296 | - | linker |
| Ser 297 | - | linker |
| Gly 298 | - | linker |
| Gly 299 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 42119.1 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 707.5 | |
| All* | Total formula weight | 42826.6 |
