2B8Q

X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with TDP

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E...	Probable nucleoside diphosphate kinase	polymer	142	16301.5	6	UniProt (Q5UQL3) Pfam (PF00334) In PDB	Mimivirus	NDK, NDP kinase
2	A, B, C, D, E...	MAGNESIUM ION	non-polymer		24.3	6	Chemie (MG)
3	A, B, C, D, E...	THYMIDINE-5'-DIPHOSPHATE	non-polymer		402.2	6	Chemie (TYD)
4	C	PHOSPHATE ION	non-polymer		95.0	1	Chemie (PO4)
5		water	water		18.0	153	Chemie (HOH)

Sequence modifications

A, B, C, D, E, F: 2 - 137 (UniProt: Q5UQL3)

PDB	External Database	Details
Tyr -4	-	expression tag
Lys -3	-	expression tag
Lys -2	-	expression tag
Ala -1	-	expression tag
Gly 0	-	expression tag
Leu 1	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	97809.0
Non-Polymers*	Number of molecules	13
	Total formula weight	2653.9
All*	Total formula weight	100462.9

*Water molecules are not included.