2ASD
oxoG-modified Insertion Ternary Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (D, H) | 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3' | polymer | 13 | 4086.7 | 2 | |||
| 2 | B, D (E, J) | 5'-D(*CP*T*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3' | polymer | 19 | 5694.7 | 2 | |||
| 3 | E, F (A, B) | DNA polymerase IV | polymer | 360 | 40825.4 | 2 | UniProt (Q97W02) Pfam (PF00817) Pfam (PF11798) Pfam (PF11799) | Sulfolobus solfataricus | Pol IV, dpo4 |
| 4 | G, H, I, J, L... (D, A, B) | CALCIUM ION | non-polymer | 40.1 | 7 | Chemie (CA) PubChem (271) | |||
| 5 | K, O (A, B) | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE | non-polymer | 467.2 | 2 | Chemie (DCP) PubChem (44119993) PubChem (65091) PubChem (46936621) PubChem (53393445) PubChem (57187895) PubChem (472334) PubChem (625) PubChem (92436637) PubChem (92449132) PubChem (92449133) PubChem (121522025) PubChem (171699322) PubChem (129069886) | |||
| 6 | P, Q, R, S, T... (D, E, H, J, A...) | water | water | 18.0 | 501 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 352 (UniProt: Q97W02)
| PDB | External Database | Details |
|---|---|---|
| Gly -7 | - | cloning artifact |
| Ser -6 | - | cloning artifact |
| His -5 | - | cloning artifact |
| Met -4 | - | cloning artifact |
| Gly -3 | - | cloning artifact |
| Gly -2 | - | cloning artifact |
| Gly -1 | - | cloning artifact |
| Gly 0 | - | cloning artifact |
| Gly 1 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 101213.6 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1214.9 | |
| All* | Total formula weight | 102428.4 |
