28ZS
Crystal structure of human DHX8 in complex with compound 53 and ADP
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Glutathione S-transferase class-mu 26 kDa isozyme,ATP-dependent RNA helicase DHX8 | polymer | 881 | 100933.3 | 1 | UniProt (P08515) UniProt (Q14562) | Homo sapiens (human) | GST 26,Sj26 antigen,SjGST,DEAH box protein 8,RNA helicase HRH1 |
| 2 | B (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 3 | C (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) PubChem (888) | |||
| 4 | D (A) | 2-[(1R)-1-phenyl-2-[4-(propan-2-ylamino)phenyl]ethyl]sulfanylpyridine-3-carboxylic acid | non-polymer | 392.5 | 1 | Chemie (A1J1K) | |||
| 5 | E, F, G (A) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 3 | Chemie (DMS) PubChem (679) | |||
| 6 | H (A) | water | water | 18.0 | 200 | Chemie (HOH) |
Sequence modifications
A: 323 - 540 (UniProt: P08515)
A: 551 - 1188 (UniProt: Q14562)
| PDB | External Database | Details |
|---|---|---|
| Met 308 | - | initiating methionine |
| Ser 309 | - | expression tag |
| Ser 310 | - | expression tag |
| His 311 | - | expression tag |
| His 312 | - | expression tag |
| His 313 | - | expression tag |
| His 314 | - | expression tag |
| His 315 | - | expression tag |
| His 316 | - | expression tag |
| His 317 | - | expression tag |
| His 318 | - | expression tag |
| Asp 319 | - | expression tag |
| Thr 320 | - | expression tag |
| Glu 321 | - | expression tag |
| Glu 322 | - | expression tag |
| Ser 541 | - | linker |
| Asp 542 | - | linker |
| Gly 543 | - | linker |
| Ser 544 | - | linker |
| Glu 545 | - | linker |
| Asn 546 | - | linker |
| Leu 547 | - | linker |
| Tyr 548 | - | linker |
| Phe 549 | - | linker |
| Gln 550 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 100933.3 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1078.4 | |
| All* | Total formula weight | 102011.7 |






