28WR
Crystal structure of the Norovirus GII.17 P domain in complex with Lacto-N-difucohexaose I
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | VP1 | polymer | 308 | 34055.0 | 2 | UniProt (A0A1C9M2L7) | Norovirus GII.17 | |
| 2 | C, D (C, D) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | branched | 999.9 | 2 | In PDB GlyTouCan (G09552LA) | |||
| 3 | E, F (A, B) | water | water | 18.0 | 1049 | Chemie (HOH) |
Sequence modifications
A, B: 225 - 528 (UniProt: A0A1C9M2L7)
| PDB | External Database | Details |
|---|---|---|
| Gly 221 | - | expression tag |
| Ala 222 | - | expression tag |
| Met 223 | - | expression tag |
| Ala 224 | - | expression tag |
| Met 334 | Val 334 | conflict |
| Ser 350 | Ala 350 | conflict |
| Arg 361 | Lys 361 | conflict |
| Lys 372 | Arg 372 | conflict |
| Gln 396 | His 396 | conflict |
| Phe 431 | Leu 431 | conflict |
| Ser 435 | Phe 435 | conflict |
| Glu 469 | Asp 469 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 68109.9 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1999.8 | |
| All* | Total formula weight | 70109.7 |
