28OI
The crystal structure of zebrafish HDAC6 CD2 in complex with compound 2
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Histone deacetylase 6 | polymer | 364 | 40285.5 | 2 | UniProt (F8W4B7) Pfam (PF00850) | Danio rerio (zebrafish) | |
| 2 | C, D, G, H (A, B) | POTASSIUM ION | non-polymer | 39.1 | 4 | Chemie (K) PubChem (813) | |||
| 3 | E, I (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) PubChem (32051) | |||
| 4 | F, J (A, B) | (3~{S})-4-(oxan-4-ylcarbonyl)-~{N}-oxidanyl-3-phenyl-3,5-dihydro-2~{H}-1,4-benzoxazepine-8-carboxamide | non-polymer | 396.4 | 2 | Chemie (A1JZP) | |||
| 5 | K, L (A, B) | water | water | 18.0 | 243 | Chemie (HOH) |
Sequence modifications
A, B: 440 - 798 (UniProt: F8W4B7)
| PDB | External Database | Details |
|---|---|---|
| Ser 435 | - | expression tag |
| Asn 436 | - | expression tag |
| Ala 437 | - | expression tag |
| Gly 438 | - | expression tag |
| Gly 439 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 80571.0 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1080.1 | |
| All* | Total formula weight | 81651.0 |
