28NP
Crystal structure of the Norovirus GII.4 P domain in complex with 3 sialyl fucosyllactose
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | VP1 | polymer | 310 | 34346.3 | 2 | UniProt (A0A4D6BSS1) | Norovirus GII.4-GII.P16 | |
| 2 | C (C) | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]beta-D-glucopyranose | branched | 779.7 | 1 | In PDB GlyTouCan (G84173YM) | |||
| 3 | D, E, J, K, L... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 6 | Chemie (EDO) | |||
| 4 | F, G, I (A, B) | THIOCYANATE ION | non-polymer | 58.1 | 3 | Chemie (SCN) PubChem (9322) | |||
| 5 | H (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) PubChem (923) | |||
| 6 | N, O (A, B) | water | water | 18.0 | 616 | Chemie (HOH) |
Sequence modifications
A, B: 225 - 530 (UniProt: A0A4D6BSS1)
| PDB | External Database | Details |
|---|---|---|
| Gly 221 | - | expression tag |
| Ala 222 | - | expression tag |
| Met 223 | - | expression tag |
| Ala 224 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 68692.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 779.7 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 569.6 | |
| All* | Total formula weight | 70042.0 |
