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28LN

XBP1u-stalled RPL4 RNC in complex with NAC

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B1)
Large ribosomal subunit protein uL4,X-box-binding protein 1, luminal form,X-box-binding protein 1, luminal form,X-box-binding protein 1, luminal formpolymer18420531.81UniProt (P17861)Homo sapiens (human)
2B
(B2)
tRNA-Met-CATpolymer7624708.91Homo sapiens
3C
(B4)
mRNA fragment (6-MER)polymer61877.21Homo sapiens
4D
(B5)
28S rRNApolymer50691640856.51Homo sapiens
5E
(B7)
5S rRNApolymer12038851.91GenBank (23898)Homo sapiens (human)
6F
(B8)
5.8S rRNApolymer15750477.91GenBank (2033716901)Homo sapiens (human)
7G
(BA)
Large ribosomal subunit protein uL2polymer25728103.91UniProt (P62917)Homo sapiens (human)60S ribosomal protein L8
8H
(BB)
Large ribosomal subunit protein uL3polymer40346224.11UniProt (P39023)Homo sapiens (human)60S ribosomal protein L3,HIV-1 TAR RNA-binding protein B,TARBP-B
9I
(BC)
60S ribosomal protein L4polymer42747804.61UniProt (P36578)Homo sapiens (human)60S ribosomal protein L1,Large ribosomal subunit protein uL4
10J
(BD)
60S ribosomal protein L5polymer29734426.81UniProt (P46777)Homo sapiens (human)Large ribosomal subunit protein uL18
11K
(BE)
Large ribosomal subunit protein eL6polymer28832810.21UniProt (Q02878)Homo sapiens (human)60S ribosomal protein L6,Neoplasm-related protein C140,Tax-responsive enhancer element-binding protein 107,TaxREB107
12L
(BF)
Large ribosomal subunit protein uL30polymer24829291.01UniProt (P18124)Homo sapiens (human)60S ribosomal protein L7
13M
(BG)
60S ribosomal protein L7apolymer26630061.81UniProt (P62424)Homo sapiens (human)Large ribosomal subunit protein eL8,PLA-X polypeptide,Surfeit locus protein 3
14N
(BH)
60S ribosomal protein L9polymer19221899.51UniProt (P32969)Homo sapiens (human)Large ribosomal subunit protein uL6
15O
(BI)
60S ribosomal protein L10polymer21424630.11UniProt (P27635)Homo sapiens (human)Laminin receptor homolog,Large ribosomal subunit protein uL16,Protein QM,Ribosomal protein L10,Tumor suppressor QM
16P
(BJ)
60S ribosomal protein L11polymer17820288.51UniProt (P62913)Homo sapiens (human)CLL-associated antigen KW-12,Large ribosomal subunit protein uL5
17Q
(BL)
60S ribosomal protein L13polymer21124321.71UniProt (P26373)Homo sapiens (human)Breast basic conserved protein 1,Large ribosomal subunit protein eL13
18R
(BM)
60S ribosomal protein L14polymer21523485.01UniProt (P50914)Homo sapiens (human)CAG-ISL 7,Large ribosomal subunit protein eL14
19S
(BN)
60S ribosomal protein L15polymer20424207.31UniProt (P61313)Homo sapiens (human)Large ribosomal subunit protein eL15
20T
(BO)
60S ribosomal protein L13apolymer20323633.41UniProt (P40429)Homo sapiens (human)23 kDa highly basic protein,Large ribosomal subunit protein uL13
21U
(BP)
60S ribosomal protein L17polymer18421443.21UniProt (P18621)Homo sapiens (human)60S ribosomal protein L23,Large ribosomal subunit protein uL22,PD-1
22V
(BQ)
60S ribosomal protein L18polymer18821687.71UniProt (Q07020)Homo sapiens (human)Large ribosomal subunit protein eL18
23W
(BR)
60S ribosomal protein L19polymer19623535.31UniProt (P84098)Homo sapiens (human)Large ribosomal subunit protein eL19
24X
(BS)
60S ribosomal protein L18apolymer17620808.51UniProt (Q02543)Homo sapiens (human)Large ribosomal subunit protein eL20
25Y
(BT)
60S ribosomal protein L21polymer16018610.01UniProt (P46778)Homo sapiens (human)Large ribosomal subunit protein eL21
26Z
(BU)
60S ribosomal protein L22polymer12814813.01UniProt (P35268)Homo sapiens (human)EBER-associated protein,EAP,Epstein-Barr virus small RNA-associated protein,Heparin-binding protein HBp15,Large ribosomal subunit protein eL22
27AA
(BV)
60S ribosomal protein L23polymer14014892.51UniProt (P62829)Homo sapiens (human)60S ribosomal protein L17,Large ribosomal subunit protein uL14
28BA
(BW)
60S ribosomal protein L24polymer15717825.11UniProt (P83731)Homo sapiens (human)60S ribosomal protein L30,Large ribosomal subunit protein eL24
29CA
(BX)
60S ribosomal protein L23apolymer15617740.21UniProt (P62750)Homo sapiens (human)Large ribosomal subunit protein uL23
30DA
(BY)
60S ribosomal protein L26polymer14517303.41UniProt (P61254)Homo sapiens (human)Large ribosomal subunit protein uL24
31EA
(BZ)
60S ribosomal protein L27polymer13615835.81UniProt (P61353)Homo sapiens (human)Large ribosomal subunit protein eL27
32FA
(Ba)
Large ribosomal subunit protein uL15polymer14816619.51UniProt (P46776)Homo sapiens (human)
33GA
(Bb)
Large ribosomal subunit protein eL29polymer15917817.31UniProt (P47914)Homo sapiens (human)60S ribosomal protein L29,Cell surface heparin-binding protein HIP
34HA
(Bc)
60S ribosomal protein L30polymer11512805.11UniProt (P62888)Homo sapiens (human)Large ribosomal subunit protein eL30
35IA
(Bd)
60S ribosomal protein L31polymer12514494.91UniProt (P62899)Homo sapiens (human)Large ribosomal subunit protein eL31
36JA
(Be)
60S ribosomal protein L32polymer13515898.91UniProt (P62910)Homo sapiens (human)Large ribosomal subunit protein eL32
37KA
(Bf)
60S ribosomal protein L35apolymer11012564.71UniProt (P18077)Homo sapiens (human)Cell growth-inhibiting gene 33 protein,Large ribosomal subunit protein eL33
38LA
(Bg)
60S ribosomal protein L34polymer11713326.11UniProt (P49207)Homo sapiens (human)Large ribosomal subunit protein eL34
39MA
(Bh)
60S ribosomal protein L35polymer12314593.61UniProt (P42766)Homo sapiens (human)Large ribosomal subunit protein uL29
40NA
(Bi)
60S ribosomal protein L36polymer10512290.91UniProt (Q9Y3U8)Homo sapiens (human)Large ribosomal subunit protein eL36
41OA
(Bj)
Large ribosomal subunit protein eL37polymer9711111.01UniProt (P61927)Homo sapiens (human)60S ribosomal protein L37,G1.16
42PA
(Bk)
60S ribosomal protein L38polymer708238.91UniProt (P63173)Homo sapiens (human)Large ribosomal subunit protein eL38
43QA
(Bl)
60S ribosomal protein L39polymer516426.81UniProt (P62891)Homo sapiens (human)Large ribosomal subunit protein eL39
44RA
(Bm)
Ubiquitin-60S ribosomal protein L40polymer12814758.41UniProt (P62987)Homo sapiens (human)CEP52,Ubiquitin A-52 residue ribosomal protein fusion product 1
45SA
(Bo)
Large ribosomal subunit protein eL42polymer10612490.01UniProt (P83881)Homo sapiens (human)60S ribosomal protein L36a,60S ribosomal protein L44,Cell growth-inhibiting gene 15 protein,Cell migration-inducing gene 6 protein
46TA
(Bp)
60S ribosomal protein L37apolymer9210299.41UniProt (P61513)Homo sapiens (human)Large ribosomal subunit protein eL43
47UA
(Br)
Large ribosomal subunit protein eL28polymer13715679.51UniProt (P46779)Homo sapiens (human)60S ribosomal protein L28
48VA
(Bs)
60S acidic ribosomal protein P0polymer31734309.41UniProt (P05388)Homo sapiens (human)60S ribosomal protein L10E,Large ribosomal subunit protein uL10
49WA
(Bt)
Large ribosomal subunit protein uL11polymer16517847.61UniProt (P30050)Homo sapiens (human)60S ribosomal protein L12
50XA
(Bu)
Nascent polypeptide-associated complex subunit alphapolymer21523406.81UniProt (Q13765)Homo sapiens (human)NAC-alpha,Alpha-NAC
51YA
(Bv)
Transcription factor BTF3polymer20622201.01UniProt (P20290)Homo sapiens (human)Nascent polypeptide-associated complex subunit beta,NAC-beta,RNA polymerase B transcription factor 3
52ZA
(A2)
18S rRNApolymer1869603622.31Homo sapiens
53AB
(AA)
Small ribosomal subunit protein uS2polymer29532778.81UniProt (P08865)Homo sapiens (human)37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,40S ribosomal protein SA,67 kDa laminin receptor,67LR,Colon carcinoma laminin-binding protein,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,Multidrug resistance-associated protein MGr1-Ag,NEM/1CHD4
54BB
(AB)
40S ribosomal protein S3apolymer26430002.11UniProt (P61247)Homo sapiens (human)Small ribosomal subunit protein eS1,v-fos transformation effector protein,Fte-1
55CB
(AC)
40S ribosomal protein S2polymer29331376.51UniProt (P15880)Homo sapiens (human)40S ribosomal protein S4,Protein LLRep3,Small ribosomal subunit protein uS5
56DB
(AD)
40S ribosomal protein S3polymer24326729.41UniProt (P23396)Homo sapiens (human)Small ribosomal subunit protein uS3
57EB
(AE)
Small ribosomal subunit protein eS4, X isoformpolymer26329654.91UniProt (P62701)Homo sapiens (human)40S ribosomal protein S4,SCR10,Single copy abundant mRNA protein
58FB
(AF)
40S ribosomal protein S5polymer20422913.51UniProt (P46782)Homo sapiens (human)Small ribosomal subunit protein uS7
59GB
(AG)
40S ribosomal protein S6polymer24928751.91UniProt (P62753)Homo sapiens (human)Phosphoprotein NP33,Small ribosomal subunit protein eS6
60HB
(AH)
40S ribosomal protein S7polymer19422168.91UniProt (P62081)Homo sapiens (human)Small ribosomal subunit protein eS7
61IB
(AI)
40S ribosomal protein S8polymer20824263.41UniProt (P62241)Homo sapiens (human)Small ribosomal subunit protein eS8
62JB
(AJ)
40S ribosomal protein S9polymer19422641.61UniProt (P46781)Homo sapiens (human)Small ribosomal subunit protein uS4
63KB
(AK)
40S ribosomal protein S10polymer16518933.81UniProt (P46783)Homo sapiens (human)Small ribosomal subunit protein eS10
64LB
(AL)
Small ribosomal subunit protein uS17polymer15818468.81UniProt (P62280)Homo sapiens (human)40S ribosomal protein S11
65MB
(AM)
40S ribosomal protein S12polymer13214539.01UniProt (P25398)Homo sapiens (human)Small ribosomal subunit protein eS12
66NB
(AN)
40S ribosomal protein S13polymer15117259.41UniProt (P62277)Homo sapiens (human)Small ribosomal subunit protein uS15
67OB
(AO)
40S ribosomal protein S14polymer15116302.81UniProt (P62263)Homo sapiens (human)Small ribosomal subunit protein uS11
68PB
(AP)
40S ribosomal protein S15polymer14517076.21UniProt (P62841)Homo sapiens (human)RIG protein,Small ribosomal subunit protein uS19
69QB
(AQ)
40S ribosomal protein S16polymer14616477.41UniProt (P62249)Homo sapiens (human)Small ribosomal subunit protein uS9
70RB
(AR)
40S ribosomal protein S17polymer13515578.21UniProt (P08708)Homo sapiens (human)Small ribosomal subunit protein eS17
71SB
(AS)
Small ribosomal subunit protein uS13polymer15217654.61UniProt (P62269)Homo sapiens (human)40S ribosomal protein S18,Ke-3,Ke3
72TB
(AT)
Small ribosomal subunit protein eS19polymer14516104.61UniProt (P39019)Homo sapiens (human)40S ribosomal protein S19
73UB
(AU)
40S ribosomal protein S20polymer11913398.81UniProt (P60866)Homo sapiens (human)Small ribosomal subunit protein uS10
74VB
(AV)
Small ribosomal subunit protein eS21polymer849150.41UniProt (P63220)Homo sapiens (human)40S ribosomal protein S21
75WB
(AW)
40S ribosomal protein S15apolymer13014865.61UniProt (P62244)Homo sapiens (human)Small ribosomal subunit protein uS8
76XB
(AX)
Small ribosomal subunit protein uS12polymer14315860.71UniProt (P62266)Homo sapiens (human)40S ribosomal protein S23
77YB
(AY)
40S ribosomal protein S24polymer13315463.31UniProt (P62847)Homo sapiens (human)Small ribosomal subunit protein eS24
78ZB
(AZ)
Small ribosomal subunit protein eS25polymer12513776.21UniProt (P62851)Homo sapiens (human)40S ribosomal protein S25
79AC
(Aa)
40S ribosomal protein S26polymer11513047.51UniProt (P62854)Homo sapiens (human)Small ribosomal subunit protein eS26
80BC
(Ab)
40S ribosomal protein S27polymer849480.21UniProt (P42677)Homo sapiens (human)Metallopan-stimulin 1,MPS-1,Small ribosomal subunit protein eS27
81CC
(Ac)
40S ribosomal protein S28polymer697855.11UniProt (P62857)Homo sapiens (human)Small ribosomal subunit protein eS28
82DC
(Ad)
40S ribosomal protein S29polymer566690.81UniProt (P62273)Homo sapiens (human)Small ribosomal subunit protein uS14
83EC
(Ae)
Ubiquitin-like FUBI-ribosomal protein eS30 fusion proteinpolymer13314415.71UniProt (P62861)Homo sapiens (human)FAU ubiquitin like and ribosomal protein S30 fusion
84FC
(Af)
Ubiquitinpolymer15618004.01UniProt (P62979)Homo sapiens (human)
85GC
(Ag)
Receptor of activated protein C kinase 1polymer31735115.71UniProt (P63244)Homo sapiens (human)Cell proliferation-inducing gene 21 protein,Guanine nucleotide-binding protein subunit beta-2-like 1,Guanine nucleotide-binding protein subunit beta-like protein 12.3,Human lung cancer oncogene 7 protein,HLC-7,Receptor for activated C kinase,Small ribosomal subunit protein RACK1
86HC
(Ah)
60S ribosomal protein L41polymer253473.51UniProt (P62945)Homo sapiens (human)HG12,Large ribosomal subunit protein eL41
87AD, AE, AF, AG, AH...
(B5, Bf, A2, AI, Bg...)
MAGNESIUM IONnon-polymer24.3432Chemie (MG)
PubChem (888)
88BO, DO, DT, ET, FO...
(Bg, Bj, Aa, Ad, Bm...)
ZINC IONnon-polymer65.48Chemie (ZN)
PubChem (32051)
Sequence modifications
B1: 1 - 158 (PDB: 28LN)
B1: 159 - 184 (UniProt: P17861)
PDBExternal DatabaseDetails
Cys 178Pro 254conflict
Ala 179Ser 255conflict
Br: 2 - 137 (UniProt: P46779)
PDBExternal DatabaseDetails
Ace 2-acetylation
AA: 2 - 295 (UniProt: P08865)
PDBExternal DatabaseDetails
Ace 2-acetylation
AO: 1 - 151 (UniProt: P62263)
PDBExternal DatabaseDetails
Ias 138Asp 138modified residue
AS: 2 - 152 (UniProt: P62269)
PDBExternal DatabaseDetails
Ace 2-acetylation
AV: 1 - 83 (UniProt: P63220)
PDBExternal DatabaseDetails
Ace 0-acetylation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains86
Total formula weight3934061.6
Non-Polymers*Number of molecules440
Total formula weight11023.0
All*Total formula weight3945084.6
*Water molecules are not included.

254917

PDB entries from 2026-06-10

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