27CK
Cryo-EM structure of the Vo domain of bafilomycin A1-bound V-ATPase from rat brain, state 1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (b) | ATPase, H+ transporting, V0 subunit B (Predicted), isoform CRA_a | polymer | 203 | 21372.3 | 1 | UniProt (B0K022) | Rattus norvegicus (Norway rat) | Atp6v0b protein |
| 2 | B (c) | V-type proton ATPase subunit S1 | polymer | 204 | 23360.6 | 1 | UniProt (O54715) Pfam (PF05827) Pfam (PF20520) | Rattus norvegicus (Norway rat) | V-ATPase subunit S1,C7-1 protein,V-ATPase Ac45 subunit,V-ATPase S1 accessory protein,Vacuolar proton pump subunit S1 |
| 3 | C (d) | V-type proton ATPase subunit | polymer | 348 | 39976.5 | 1 | UniProt (Q5M7T6) | Rattus norvegicus (Norway rat) | |
| 4 | D (e) | V-type proton ATPase subunit e 2 | polymer | 37 | 4107.0 | 1 | UniProt (Q5EB76) Pfam (PF05493) | Rattus norvegicus (Norway rat) | V-ATPase subunit e 2,Vacuolar proton pump subunit e 2 |
| 5 | E, F, G, H, I... (g, h, i, j, k...) | V-type proton ATPase 16 kDa proteolipid subunit c | polymer | 150 | 15256.1 | 9 | UniProt (P63081) Pfam (PF00137) | Rattus norvegicus (Norway rat) | V-ATPase 16 kDa proteolipid subunit c,Vacuolar proton pump 16 kDa proteolipid subunit c |
| 6 | N (q) | Renin receptor cytoplasmic fragment | polymer | 51 | 5984.9 | 1 | UniProt (Q6AXS4) Pfam (PF07850) | Rattus norvegicus (Norway rat) | |
| 7 | O (a) | V-type proton ATPase 116 kDa subunit a 1 | polymer | 464 | 52750.4 | 1 | UniProt (P25286) Pfam (PF01496) | Rattus norvegicus (Norway rat) | V-ATPase 116 kDa subunit a 1,Clathrin-coated vesicle/synaptic vesicle proton pump 116 kDa subunit,Vacuolar adenosine triphosphatase subunit Ac116,Vacuolar proton pump subunit 1,Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 |
| 8 | P, Q, R, S, T... (b, h, i, l, m...) | (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose | non-polymer | 622.8 | 8 | Chemie (WEV) PubChem (5702538) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 15 |
| Total formula weight | 284856.8 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 4982.6 | |
| All* | Total formula weight | 289839.5 |
