1Z5S
Crystal structure of a complex between UBC9, SUMO-1, RANGAP1 and NUP358/RANBP2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Ubiquitin-conjugating enzyme E2 I | polymer | 158 | 18030.8 | 1 | UniProt (P63279) Pfam (PF00179) | Homo sapiens (human) | Ubiquitin-protein ligase I, Ubiquitin carrier protein I, SUMO-1-protein ligase, SUMO- 1 conjugating enzyme, Ubiquitin carrier protein 9, p18 |
| 2 | B (B) | Ubiquitin-like protein SMT3C | polymer | 82 | 9473.8 | 1 | UniProt (P63165) Pfam (PF11976) | Homo sapiens (human) | Ubiquitin-homology domain protein PIC1, Ubiquitin-like protein UBL1, Ubiquitin-related protein SUMO-1, GAP modifying protein 1, GMP1, Sentrin, OK/SW-cl.43 |
| 3 | C (C) | Ran GTPase-activating protein 1 | polymer | 172 | 18686.6 | 1 | UniProt (P46060) Pfam (PF07834) | Homo sapiens (human) | |
| 4 | D (D) | Ran-binding protein 2 | polymer | 83 | 9544.6 | 1 | UniProt (P49792) Pfam (PF12185) | Homo sapiens (human) | RanBP2, Nuclear pore complex protein Nup358, Nucleoporin Nup358, 358 kDa nucleoporin, P270 |
| 5 | E, F, G, H (A, B, C, D) | water | water | 18.0 | 28 | Chemie (HOH) |
Sequence modifications
B: 18 - 97 (UniProt: P63165)
C: 418 - 587 (UniProt: P46060)
D: 2631 - 2711 (UniProt: P49792)
| PDB | External Database | Details |
|---|---|---|
| Met 16 | - | cloning artifact |
| Gly 17 | - | cloning artifact |
| PDB | External Database | Details |
|---|---|---|
| Ser 416 | - | cloning artifact |
| Leu 417 | - | cloning artifact |
| PDB | External Database | Details |
|---|---|---|
| Ser 2629 | - | cloning artifact |
| Leu 2630 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 55735.8 | |
| All* | Total formula weight | 55735.8 |
