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1XPU

Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-(3-formylphenylsulfanyl)-dihydrobicyclomycin (FPDB)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(G, M, H, J, K...)
5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3'polymer82400.46
2G, H, I, J, K...
(A, B, C, D, E...)
Rho transcription termination factorpolymer41947070.26UniProt (P22869)
Pfam (PF07498)
Pfam (PF07497)
Pfam (PF00006)
UniProt (by SIFTS) (P0AG30)
Escherichia coli
3BA, M, O, R, U...
(F, A, B, C, D...)
MAGNESIUM IONnon-polymer24.36Chemie (MG)
4AA, N, P, S, V...
(E, A, B, C, D)
PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTERnon-polymer523.26Chemie (AGS)
5CA, Q, T, W, Z
(F, B, C, D, E)
5A-(3-FORMYLPHENYLSULFANYL)-DIHYDROBICYCLOMYCINnon-polymer440.55Chemie (FPD)
6DA, EA, FA, GA, HA...
(G, H, A, B, C...)
waterwater18.020Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight296823.6
Non-Polymers*Number of molecules17
Total formula weight5487.6
All*Total formula weight302311.3
*Water molecules are not included.

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PDB entries from 2025-12-24

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