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1VK6

Crystal structure of NADH pyrophosphatase (1790429) from Escherichia coli k12 at 2.20 A resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NADH pyrophosphatasepolymer26931561.71UniProt (P32664)
Pfam (PF09297)
Pfam (PF00293)
Escherichia coli
2B
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
3C, D, E
(A)
(4S)-2-METHYL-2,4-PENTANEDIOLnon-polymer118.23Chemie (MPD)
4F
(A)
waterwater18.096Chemie (HOH)
Sequence modifications
A: 1 - 257 (UniProt: P32664)
PDBExternal DatabaseDetails
Met -11-expression tag
Gly -10-expression tag
Ser -9-expression tag
Asp -8-expression tag
Lys -7-expression tag
Ile -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
Mse 1Met 1modified residue
Ala 33Arg 33SEE REMARK 999
Mse 65Met 65modified residue
Mse 105Met 105modified residue
Mse 114Met 114modified residue
Mse 176Met 176modified residue
Mse 201Met 201modified residue
Mse 205Met 205modified residue
Mse 251Met 251modified residue
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight31561.7
Non-Polymers*Number of molecules4
Total formula weight419.9
All*Total formula weight31981.6
*Water molecules are not included.

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PDB entries from 2025-06-18

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