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1U47

cytosine-8-Oxoguanine base pair at the polymerase active site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)
DNA primer strandpolymer113310.21
2B
(C)
DNA template strand with 8-oxoguaninepolymer154626.01
3C
(A)
DNA polymerase Ipolymer58066114.71UniProt (P52026)
Pfam (PF22619)
Pfam (PF00476)
Geobacillus stearothermophilusPOL I
4D
(D)
beta-D-fructofuranose-(2-1)-alpha-D-glucopyranosebranched342.31In PDB
BIRD (PRD_900003)
sucrose
5E, F, G
(A)
SULFATE IONnon-polymer96.13Chemie (SO4)
6H
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
7I, J, K
(B, C, A)
waterwater18.0397Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight74050.9
BranchedNumber of molecules1
Total formula weight342.3
Non-Polymers*Number of molecules4
Total formula weight312.5
All*Total formula weight74705.7
*Water molecules are not included.

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PDB entries from 2025-12-17

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