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1S3R

Crystal structure of the human-specific toxin intermedilysin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
intermedilysinpolymer53559064.92UniProt (Q9LCB8)
Pfam (PF01289)
Pfam (PF17440)
Streptococcus intermedius
2C, D, E, F
(A, B)
SULFATE IONnon-polymer96.14Chemie (SO4)
3G, H
(A, B)
waterwater18.0451Chemie (HOH)
Sequence modifications
A, B: 34 - 532 (UniProt: Q9LCB8)
PDBExternal DatabaseDetails
Met -2-expression tag
Gly -1-expression tag
Gly 0-expression tag
Ser 1-expression tag
His 2-expression tag
His 3-expression tag
His 4-expression tag
His 5-expression tag
His 6-expression tag
His 7-expression tag
Gly 8-expression tag
Met 9-expression tag
Ala 10-expression tag
Ser 11-expression tag
Met 12-expression tag
Thr 13-expression tag
Gly 14-expression tag
Gly 15-expression tag
Gln 16-expression tag
Gln 17-expression tag
Met 18-expression tag
Gly 19-expression tag
Arg 20-expression tag
Asp 21-expression tag
Leu 22-expression tag
Tyr 23-expression tag
Asp 24-expression tag
Asp 25-expression tag
Asp 26-expression tag
Asp 27-expression tag
Lys 28-expression tag
Asp 29-expression tag
Arg 30-expression tag
Trp 31-expression tag
Gly 32-expression tag
Ser 33-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight118129.8
Non-Polymers*Number of molecules4
Total formula weight384.3
All*Total formula weight118514.0
*Water molecules are not included.

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PDB entries from 2025-06-18

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