1RXQ
YfiT from Bacillus subtilis is a probable metal-dependent hydrolase with an unusual four-helix bundle topology
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | yfiT | polymer | 178 | 20886.0 | 4 | GenBank (16077906) Pfam (PF12867) UniProt (by SIFTS) (O31562) | Bacillus subtilis | |
| 2 | E, F, G, H (A, B, C, D) | NICKEL (II) ION | non-polymer | 58.7 | 4 | Chemie (NI) PubChem (934) | |||
| 3 | I (D) | GLUTAMIC ACID | non-polymer | 147.1 | 1 | Chemie (GLU) PubChem (611) PubChem (23327) PubChem (33032) | |||
| 4 | J, M (D) | SERINE | non-polymer | 105.1 | 2 | Chemie (SER) PubChem (617) PubChem (5951) PubChem (71077) | |||
| 5 | K (D) | ALANINE | non-polymer | 89.1 | 1 | Chemie (ALA) | |||
| 6 | L (D) | THREONINE | non-polymer | 119.1 | 1 | Chemie (THR) PubChem (205) PubChem (69435) PubChem (90624) PubChem (99289) PubChem (6399258) PubChem (11768555) PubChem (17757249) PubChem (17757244) PubChem (6288) | |||
| 7 | N (D) | GLYCINE | non-polymer | 75.1 | 1 | Chemie (GLY) PubChem (750) | |||
| 8 | O, P, Q, R (A, B, C, D) | water | water | 18.0 | 469 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 178 (GenBank: 16077906)
| PDB | External Database | Details |
|---|---|---|
| Mse 1 | Met 1 | modified residue |
| Mse 45 | Met 45 | modified residue |
| Mse 73 | Met 73 | modified residue |
| Mse 175 | Met 175 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 83543.9 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 875.4 | |
| All* | Total formula weight | 84419.3 |
