1RKY
PPLO + Xe
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | lysyl oxidase | polymer | 747 | 85289.1 | 1 | GenBank (13936870) UniProt (by SIFTS) (Q96X16) | Pichia pastoris | PPLO |
| 2 | B (B) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 3 | C, D, E, F (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
| 4 | G (A) | COPPER (II) ION | non-polymer | 63.5 | 1 | Chemie (CU) | |||
| 5 | H, I (A) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
| 6 | J, K, L (A) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
| 7 | M, N, O, P, Q... (A) | CHLORIDE ION | non-polymer | 35.5 | 6 | Chemie (CL) | |||
| 8 | S (A) | IMIDAZOLE | non-polymer | 69.1 | 1 | Chemie (IMD) | |||
| 9 | AA, T, U, V, W... (A) | XENON | non-polymer | 131.3 | 8 | Chemie (XE) | |||
| 10 | BA (A) | water | water | 18.0 | 632 | Chemie (HOH) |
Sequence modifications
A: 41 - 787 (GenBank: 13936870)
| PDB | External Database | Details |
|---|---|---|
| Val 314 | Ile 314 | conflict |
| Asp 338 | Glu 338 | conflict |
| Ser 417 | Ala 417 | conflict |
| Tpq 478 | Tyr 478 | modified residue |
| Gln 549 | Lys 549 | conflict |
| Phe 577 | Leu 577 | conflict |
| Asn 579 | Lys 579 | conflict |
| Thr 650 | Glu 650 | conflict |
| Val 758 | Leu 758 | conflict |
| Ala 761 | Pro 761 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 85289.1 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 586.5 | |
| Non-Polymers* | Number of molecules | 25 |
| Total formula weight | 2433.6 | |
| All* | Total formula weight | 88309.3 |
