1QD7
PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | CENTRAL FRAGMENT OF 16 S RNA | polymer | 271 | 53096.6 | 1 | Thermus thermophilus | ||
| 2 | B (B) | END FRAGMENT OF 16 S RNA | polymer | 88 | 17211.4 | 1 | Thermus thermophilus | ||
| 3 | C (C) | S4 RIBOSOMAL PROTEIN | polymer | 159 | 18624.4 | 1 | UniProt (P81288) Pfam (PF00163) Pfam (PF01479) | Thermus thermophilus | |
| 4 | D (D) | S5 RIBOSOMAL PROTEIN | polymer | 145 | 15240.7 | 1 | UniProt (P02357) Pfam (PF00333) Pfam (PF03719) | Thermus thermophilus | |
| 5 | E (E) | S6 RIBOSOMAL PROTEIN | polymer | 97 | 11619.3 | 1 | UniProt (P23370) Pfam (PF01250) UniProt (by SIFTS) (Q5SLP8) | Thermus thermophilus | |
| 6 | F (F) | S7 RIBOSOMAL PROTEIN | polymer | 135 | 15342.8 | 1 | UniProt (P17291) Pfam (PF00177) | Thermus thermophilus | |
| 7 | G (G) | S8 RIBOSOMAL PROTEIN | polymer | 136 | 15624.2 | 1 | UniProt (P24319) Pfam (PF00410) UniProt (by SIFTS) (P0DOY9) | Thermus thermophilus | |
| 8 | H (H) | S15 RIBOSOMAL PROTEIN | polymer | 85 | 10200.8 | 1 | UniProt (P05766) Pfam (PF00312) | Thermus thermophilus | |
| 9 | I (I) | S17 RIBOSOMAL PROTEIN | polymer | 89 | 10081.9 | 1 | UniProt (P23828) Pfam (PF00366) | Thermus thermophilus | |
| 10 | J (J) | S20 RIBOSOMAL PROTEIN | polymer | 100 | 8528.5 | 1 | Thermus thermophilus |
Sequence modifications
C: 43 - 200 (UniProt: P81288)
G: 4 - 138 (UniProt: P24319)
I: 5 - 86 (UniProt: P23828)
| PDB | External Database | Details |
|---|---|---|
| Leu 120 | Ile 118 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Asp 25 | Glu 24 | conflict |
| Arg 37 | Lys 36 | conflict |
| Asp 52 | Glu 51 | conflict |
| Val 61 | Ile 60 | conflict |
| Tyr 62 | His 61 | conflict |
| His 81 | Lys 80 | conflict |
| Lys 88 | Arg 87 | conflict |
| Ser 115 | Pro 114 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Arg 85 | Val 85 | conflict |
| Ala 86 | Leu 86 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 175570.7 | |
| All* | Total formula weight | 175570.7 |






