1PT8
Crystal structure of the yfdW gene product of E. coli, in complex with oxalate and acetyl-CoA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | Hypothetical protein yfdW | polymer | 437 | 48412.8 | 2 | UniProt (P69902) Pfam (PF02515) In PDB | Escherichia coli Shigella flexneri ( ) | |
| 2 | A, B | OXALATE ION | non-polymer | 88.0 | 2 | Chemie (OXL) | |||
| 3 | A, B | ACETYL COENZYME *A | non-polymer | 809.6 | 2 | Chemie (ACO) | |||
| 4 | A, B | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
| 5 | water | water | 18.0 | 454 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 416 (UniProt: P69902)
| PDB | External Database | Details |
|---|---|---|
| Ser -20 | - | cloning artifact |
| Tyr -19 | - | cloning artifact |
| Tyr -18 | - | cloning artifact |
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| Leu -11 | - | cloning artifact |
| Glu -10 | - | cloning artifact |
| Ser -9 | - | cloning artifact |
| Thr -8 | - | cloning artifact |
| Ser -7 | - | cloning artifact |
| Leu -6 | - | cloning artifact |
| Tyr -5 | - | cloning artifact |
| Lys -4 | - | cloning artifact |
| Lys -3 | - | cloning artifact |
| Ala -2 | - | cloning artifact |
| Gly -1 | - | cloning artifact |
| Leu 0 | - | cloning artifact |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 96825.6 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 2255.7 | |
| All* | Total formula weight | 99081.2 |
