1P0Y
Crystal structure of the SET domain of LSMT bound to MeLysine and AdoHcy
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast | polymer | 444 | 50629.2 | 3 | UniProt (Q43088) | Pisum sativum (pea) | [Ribulose-bisphosphate-carboxylase]-lysine N-methyltransferase, RuBisCO methyltransferase, RuBisco LSMT, rbcMT |
| 2 | D, E, F (A, B, C) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 3 | Chemie (SAH) PubChem (16760024) PubChem (193) PubChem (13792) PubChem (177678424) PubChem (189149) PubChem (439155) PubChem (25210495) PubChem (21125603) PubChem (44361184) PubChem (25203782) PubChem (46936206) PubChem (50989525) PubChem (51380914) PubChem (52224398) PubChem (57544532) PubChem (52224400) PubChem (59046843) PubChem (59170628) PubChem (59576228) PubChem (66805708) PubChem (5284331) PubChem (70689219) PubChem (70702054) PubChem (70832431) PubChem (71170554) PubChem (13231890) PubChem (6419189) PubChem (118374891) PubChem (118560068) PubChem (126969526) PubChem (129105892) PubChem (164157219) PubChem (143518505) PubChem (154578335) PubChem (163054214) PubChem (163335525) | |||
| 3 | G, H, I (C) | N-METHYL-LYSINE | non-polymer | 160.2 | 3 | Chemie (MLZ) PubChem (164795) PubChem (40489127) PubChem (541646) | |||
| 4 | J, K, L (A, B, C) | water | water | 18.0 | 652 | Chemie (HOH) |
Sequence modifications
A, B, C: 46 - 482 (UniProt: Q43088)
| PDB | External Database | Details |
|---|---|---|
| Met 45 | - | initiating methionine |
| Glu 483 | - | engineered mutation |
| Asn 484 | - | engineered mutation |
| Leu 485 | - | engineered mutation |
| Tyr 486 | - | engineered mutation |
| Phe 487 | - | engineered mutation |
| Gln 488 | - | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 151887.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1633.9 | |
| All* | Total formula weight | 153521.4 |
