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1OFL

CRYSTAL STRUCTURE OF CHONDROITINASE B COMPLEXED TO DERMATAN SULFATE HEXASACCHARIDE

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ACHONDROITINASE Bpolymer48153688.81UniProt (Q46079)
Pfam (PF14592)
In PDB
PEDOBACTER HEPARINUSCHONDROITIN B LYASE, CHONDROITIN SULFATE B LYASE, CHONDROITIN B ELIMINASE
2Balpha-D-galactopyranose-(1-3)-[beta-D-glucopyranose-(1-4)]2-O-methyl-alpha-L-fucopyranose-(1-4)-beta-D-xylopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-2)-[alpha-L-rhamnopyranose-(1-4)]alpha-D-mannopyranosebranched1119.01In PDB
GlyTouCan (G34677QH)
3C, D, E4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranosebranched459.43In PDB
GlyTouCan (G76516UK)
4F4-deoxy-alpha-L-threo-hex-4-enopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-alpha-D-galactopyranosebranched459.41In PDB
GlyTouCan (G03335QO)
5ACALCIUM IONnon-polymer40.11Chemie (CA)
6waterwater18.0757Chemie (HOH)
Sequence modifications
A: 26 - 26 (PDB: 1OFL)
A: 27 - 506 (UniProt: Q46079)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight53688.8
BranchedNumber of molecules5
Total formula weight2956.5
Non-Polymers*Number of molecules1
Total formula weight40.1
All*Total formula weight56685.4
*Water molecules are not included.

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PDB entries from 2024-06-12

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