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1NJM

The crystal structure of the 50S Large ribosomal subunit from Deinococcus radiodurans complexed with a tRNA acceptor stem mimic (ASM) and the antibiotic sparsomycin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(0)
23S ribosomal RNApolymer2880933405.01GenBank (6460405)Deinococcus radiodurans
2B
(5)
tRNA acceptor stem mimicpolymer3511391.91
3C
(K)
50S ribosomal protein L16polymer14116126.01UniProt (Q9RXJ5)
Pfam (PF00252)
Deinococcus radiodurans
4D
(T)
GENERAL STRESS PROTEIN CTCpolymer23725415.41UniProt (Q9RX88)
Pfam (PF01386)
Pfam (PF14693)
Deinococcus radiodurans
5E
(0)
SPARSOMYCINnon-polymer361.41Chemie (SPS)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight986338.4
Non-Polymers*Number of molecules1
Total formula weight361.4
All*Total formula weight986699.8
*Water molecules are not included.

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PDB entries from 2025-12-24

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