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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

1NJI

Structure of chloramphenicol bound to the 50S ribosomal subunit

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A23S ribosomal RNApolymer2922946034.41GenBank (3377779)Haloarcula marismortui
2B5S ribosomal RNApolymer12239318.41GenBank (3377779)Haloarcula marismortui
3C50S ribosomal protein L2Ppolymer23925237.51UniProt (P20276)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Haloarcula marismortuiHmal2, HL4
4D50S ribosomal protein L3Ppolymer33737265.21UniProt (P20279)
Pfam (PF00297)
In PDB		Haloarcula marismortuiHmal3, HL1
5E50S ribosomal protein L4Epolymer24626442.11UniProt (P12735)
Pfam (PF00573)
In PDB		Haloarcula marismortuiHmal4, HL6
6F50S ribosomal protein L5Ppolymer17619420.51UniProt (P14124)
Pfam (PF00673)
Pfam (PF00281)
In PDB		Haloarcula marismortuiHmal5, HL13
7G50S ribosomal protein L6Ppolymer17719830.51UniProt (P14135)
Pfam (PF00347)
In PDB		Haloarcula marismortuiHmal6, HL10
8H50S ribosomal protein L7Aepolymer11912600.81UniProt (P12743)
Pfam (PF01248)
In PDB		Haloarcula marismortuiHS6
9IAcidic ribosomal protein P0 homologpolymer34837213.81UniProt (P15825)
Pfam (PF00466)
Pfam (PF17777)
In PDB		Haloarcula marismortuiL10E, HMaL10
10J50S ribosomal protein L10epolymer16718022.51Pfam (PF00252)
UniProt (by SIFTS) (P60617)
In PDB		Haloarcula marismortui
11K50S ribosomal protein L13Ppolymer14516249.21UniProt (P29198)
Pfam (PF00572)
In PDB		Haloarcula marismortuiHmal13
12L50S ribosomal protein L14Ppolymer13214216.21UniProt (P22450)
Pfam (PF00238)
In PDB		Haloarcula marismortuiHmal14, HL27
13M50S ribosomal protein L15Ppolymer16417874.21UniProt (P12737)
Pfam (PF00828)
In PDB		Haloarcula marismortuiHmal15, HL9
14N50S ribosomal protein L15Epolymer19422856.61Pfam (PF00827)
UniProt (by SIFTS) (P60618)
In PDB		Haloarcula marismortui
15O50S ribosomal protein L18Ppolymer18620509.71UniProt (P14123)
Pfam (PF17144)
In PDB		Haloarcula marismortuiHmal18, HL12
16P50S ribosomal protein L18Epolymer11512307.71UniProt (P12733)
Pfam (PF00828)
In PDB		Haloarcula marismortuiHL29, L19
17Q50S ribosomal protein L19Epolymer14816631.31UniProt (P14119)
Pfam (PF01280)
In PDB		Haloarcula marismortuiHmal19, HL24
18R50S ribosomal protein L21epolymer9510436.61UniProt (P12734)
Pfam (PF01157)
In PDB		Haloarcula marismortuiHL31
19S50S ribosomal protein L22Ppolymer15416835.71UniProt (P10970)
Pfam (PF00237)
In PDB		Haloarcula marismortuiHmal22, HL23
20T50S ribosomal protein L23Ppolymer849481.31UniProt (P12732)
Pfam (PF00276)
In PDB		Haloarcula marismortuiHmal23, HL25, L21
21U50S ribosomal protein L24Ppolymer11913539.81UniProt (P10972)
Pfam (PF16906)
Pfam (PF00467)
In PDB		Haloarcula marismortuiHmal24, HL16, HL15
22V50S ribosomal protein L24Epolymer667233.71UniProt (P14116)
Pfam (PF01246)
In PDB		Haloarcula marismortuiHL21/HL22
23W50S ribosomal protein L29Ppolymer707758.71UniProt (P10971)
Pfam (PF00831)
In PDB		Haloarcula marismortuiHmal29, HL33
24X50S ribosomal protein L30Ppolymer15417062.91UniProt (P14121)
Pfam (PF00327)
In PDB		Haloarcula marismortuiHmal30, HL20, HL16
25Y50S ribosomal protein L31Epolymer9110253.41UniProt (P18138)
Pfam (PF01198)
In PDB		Haloarcula marismortuiL34, HL30
26Z50S ribosomal protein L32Epolymer24026324.51UniProt (P12736)
Pfam (PF14520)
Pfam (PF01655)
In PDB		Haloarcula marismortuiHL5
27150S ribosomal protein L37AEpolymer738097.81Pfam (PF01780)
UniProt (by SIFTS) (P60619)
In PDB		Haloarcula marismortui
28250S ribosomal protein L37epolymer566199.01UniProt (P32410)
Pfam (PF01907)
In PDB		Haloarcula marismortuiL35e
29350S ribosomal protein L39epolymer485844.71UniProt (P22452)
Pfam (PF00832)
In PDB		Haloarcula marismortuiHL39e, HL46e
30450S ribosomal protein L44Epolymer9210815.21UniProt (P32411)
Pfam (PF00935)
In PDB		Haloarcula marismortuiLA, HLA
31A, L, B, C, U...MAGNESIUM IONnon-polymer24.3117Chemie (MG)
32APOTASSIUM IONnon-polymer39.12Chemie (K)
33A, M, N, R, S...SODIUM IONnon-polymer23.085Chemie (NA)
34K, 4, A, M, N...CHLORIDE IONnon-polymer35.522Chemie (CL)
35ACHLORAMPHENICOLnon-polymer323.11Chemie (CLM)
364, P, V, 1, 2CADMIUM IONnon-polymer112.45Chemie (CD)
37waterwater18.07867Chemie (HOH)
Sequence modifications
D: 1 - 337 (UniProt: P20279)
PDBExternal DatabaseDetails
-Pro 310SEE REMARK 999
Arg 310Phe 311SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains30
Total formula weight1451914.1
Non-Polymers*Number of molecules232
Total formula weight6541.2
All*Total formula weight1458455.3
*Water molecules are not included.

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PDB entries from 2024-07-24

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